fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm049225 not found in 326aa AT5G11260.1 not_1st 0.624434389 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G11260.1     MQEQ--------------------------------------------------------
gm049225_Glyma1 MERSGGMVTGSHERNELVRVRHGSDSGAKPLKNLNGQICQICGDTIGLTATGDLFVACHE
                *:..                                                        

AT5G11260.1     ------------------------------------------------------------
gm049225_Glyma1 CGFPLCHSCYEYELKNVSQSCPQCKTTFTSRQGGAEVEGDDDDEDDADDLDNGINYGQGN
                                                                            

AT5G11260.1     -----------------------------------------ATS---SLAASSLPSSSER
gm049225_Glyma1 NSKSGMLWEEDADLSSSSGHDSHIPNPHLVNGQPVSGEFPCATSDAQSMQTTSDPMGQSE
                                                         ***   *: ::* * ....

AT5G11260.1     SSSSAPHLEIKE-GIESDEEIRRVPEFGGEAVGKETSGRESGSATGQERTQATVGESQRK
gm049225_Glyma1 KVHSLPYADPKQPGPESDEEIRRVPEIGGESAGTSASRPDAGSNAGTERAQGT-GDSQKK
                .  * *: : *: * ***********:***:.*..:*  ::** :* **:*.* *:**:*

AT5G11260.1     RGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSELENRVKDLENKNSELEERLSTLQN
gm049225_Glyma1 RGRSPADKESKRLKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELKERLSTLQN
                ***:**:**.************************ :**.******:*****:********

AT5G11260.1     ENQMLRHILKNTTGNKRGGGGGSNADASL
gm049225_Glyma1 ENQMLRQVLKNTTASRRGSNSGTNNAE--
                ******::*****..:**...*:*
BoxShade v3.31 C (beta, 970507) Output
AT5G11260.1     M Q E Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm049225_Glyma1    M E R S G G M V T G S H E R N E L V R V R H G S D S G A K P L K N L N G Q I C Q I C G D T I G L T A T G D L F V A C H E
 
AT5G11260.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm049225_Glyma1    C G F P L C H S C Y E Y E L K N V S Q S C P Q C K T T F T S R Q G G A E V E G D D D D E D D A D D L D N G I N Y G Q G N
 
AT5G11260.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A T S - - - S L A A S S L P S S S E R
gm049225_Glyma1    N S K S G M L W E E D A D L S S S S G H D S H I P N P H L V N G Q P V S G E F P C A T S D A Q S M Q T T S D P M G Q S E
 
AT5G11260.1     S S S S A P H L E I K E - G I E S D E E I R R V P E F G G E A V G K E T S G R E S G S A T G Q E R T Q A T V G E S Q R K
gm049225_Glyma1    K V H S L P Y A D P K Q P G P E S D E E I R R V P E I G G E S A G T S A S R P D A G S N A G T E R A Q G T - G D S Q K K
 
AT5G11260.1     R G R T P A E K E N K R L K R L L R N R V S A Q Q A R E R K K A Y L S E L E N R V K D L E N K N S E L E E R L S T L Q N
gm049225_Glyma1    R G R S P A D K E S K R L K R L L R N R V S A Q Q A R E R K K A Y L I D L E T R V K D L E K K N S E L K E R L S T L Q N
 
AT5G11260.1     E N Q M L R H I L K N T T G N K R G G G G G S N A D A S L
gm049225_Glyma1    E N Q M L R Q V L K N T T A S R R G S N S G T N N A E - -
 
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