fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm020101 not found in 242aa AT5G25810.1 not_not 0.423255813 III
Pt029396 not found in 233aa AT5G25810.1 not_not 0.444186046 III
Pt011904 not found in 231aa AT5G25810.1 not_not 0.430232558 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G11590.1     -MAEEYYSLRSERV--TQLLVPNSESDSVSDKSKAEQS---------EKKTK-RGRD-SG
pt029396_POPTR_ MTKEESSNRSCSSICTTSSSSSSSFATTITNKLKKQNPV--------DQKSR-KARD-CS
pt011904_POPTR_ -MNEESTSSSNS----TCNSPPPSLATTITNKLNKQNPI--------QQSSRSKVRD-CS
gm020101_Glyma0 -MAE----------------LPSSEASSSSASSRKHSSSEAHLPAPDQKRPK-QARDSSS
                   *                 . * : : : . . ...         :: .: : ** ..

AT5G11590.1     KHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNF
pt029396_POPTR_ KHAVYRGVRRRAWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDVAALSIKGDSAILNF
pt011904_POPTR_ KHPVYRGVRRRAWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDVAALCIKGDSAILNF
gm020101_Glyma0 KHPVFRGVRMRAWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALAIKGNSAILNF
                **.*:**** * *********:****.*******.*.************.*** :*****

AT5G11590.1     PELADSFPRPVSLSPRDIQTAALKAAHME----PTTSFSSSTSSSSSLSSTSSLESLVLV
pt029396_POPTR_ PELAASLPRPVSLMPRDIQAAAAKAAAMV--------DFNSSSPPSSLSSS----SVSVS
pt011904_POPTR_ PELADSLPRPVSVMPRDIQSAAAKAAAMV--------EFNSPSPSSSLSSS----SVTVS
gm020101_Glyma0 PELAASLPRPDSNSPRDVQAAAAKAAAMEVNDVPTTPSSSSSSASLSLSQSSSWSSLAVS
                **** *:*** *  ***:*:** *** *           .*.*.. ***.:    *: : 

AT5G11590.1     MDLSRTES--EELGEIVELPSLGASYDVDSANLGNEFVFYDSVD--YCLYPPPWGQSSED
pt029396_POPTR_ EDVAESEE--EYLSEIVELPNIEGSFDSPDQS-QTEFMLFDSVD--RWVYP-PLDLSGE-
pt011904_POPTR_ EDVAESEE--EYLSEIVELPNIEGSFDSPDQS-RIEFMLFDSVDGHGWVYP-PLDLCGE-
gm020101_Glyma0 SSSGDGPSTPEELGEIVELPSLGTSFEIPDPS--GELVYLD---------PWPYSQA---
                 . .   .  * *.******.:  *::  . .   *::  *         * * . .   

AT5G11590.1     NYGHGI---SPNFGHGLS--------------WDL
pt029396_POPTR_ -FCDQL--------LGLE---SLIPSNFGGSELN-
pt011904_POPTR_ -FSDQL--------LGLE---SLISSNLAGSVLN-
gm020101_Glyma0 -WSHGIYDESEGYFIGDSETESMILCGFEGSLWQH
                 : . :         * .               :
BoxShade v3.31 C (beta, 970507) Output
AT5G11590.1     - M A E E Y Y S L R S E R V - - T Q L L V P N S E S D S V S D K S K A E Q S - - - - - - - - - E K K T K - R G R D - S G
pt029396_POPTR_    M T K E E S S N R S C S S I C T T S S S S S S S F A T T I T N K L K K Q N P V - - - - - - - - D Q K S R - K A R D - C S
pt011904_POPTR_    - M N E E S T S S S N S - - - - T C N S P P P S L A T T I T N K L N K Q N P I - - - - - - - - Q Q S S R S K V R D - C S
gm020101_Glyma0    - M A E - - - - - - - - - - - - - - - - L P S S E A S S S S A S S R K H S S S E A H L P A P D Q K R P K - Q A R D S S S
 
AT5G11590.1     K H P V Y R G V R M R N W G K W V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G T A A I L N F
pt029396_POPTR_    K H A V Y R G V R R R A W G K W V S E I R Q P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G D S A I L N F
pt011904_POPTR_    K H P V Y R G V R R R A W G K W V S E I R Q P R K K S R I W L G T F P T P E M A A R A H D V A A L C I K G D S A I L N F
gm020101_Glyma0    K H P V F R G V R M R A W G K W V S E I R E P R K K N R I W L G T F A T A E M A A R A H D V A A L A I K G N S A I L N F
 
AT5G11590.1     P E L A D S F P R P V S L S P R D I Q T A A L K A A H M E - - - - P T T S F S S S T S S S S S L S S T S S L E S L V L V
pt029396_POPTR_    P E L A A S L P R P V S L M P R D I Q A A A A K A A A M V - - - - - - - - D F N S S S P P S S L S S S - - - - S V S V S
pt011904_POPTR_    P E L A D S L P R P V S V M P R D I Q S A A A K A A A M V - - - - - - - - E F N S P S P S S S L S S S - - - - S V T V S
gm020101_Glyma0    P E L A A S L P R P D S N S P R D V Q A A A A K A A A M E V N D V P T T P S S S S S S A S L S L S Q S S S W S S L A V S
 
AT5G11590.1     M D L S R T E S - - E E L G E I V E L P S L G A S Y D V D S A N L G N E F V F Y D S V D - - Y C L Y P P P W G Q S S E D
pt029396_POPTR_    E D V A E S E E - - E Y L S E I V E L P N I E G S F D S P D Q S - Q T E F M L F D S V D - - R W V Y P - P L D L S G E -
pt011904_POPTR_    E D V A E S E E - - E Y L S E I V E L P N I E G S F D S P D Q S - R I E F M L F D S V D G H G W V Y P - P L D L C G E -
gm020101_Glyma0    S S S G D G P S T P E E L G E I V E L P S L G T S F E I P D P S - - G E L V Y L D - - - - - - - - - P W P Y S Q A - - -
 
AT5G11590.1     N Y G H G I - - - S P N F G H G L S - - - - - - - - - - - - - - W D L
pt029396_POPTR_    - F C D Q L - - - - - - - - L G L E - - - S L I P S N F G G S E L N -
pt011904_POPTR_    - F S D Q L - - - - - - - - L G L E - - - S L I S S N L A G S V L N -
gm020101_Glyma0    - W S H G I Y D E S E G Y F I G D S E T E S M I L C G F E G S L W Q H
 
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