fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009314 not found in 188aa AT5G11590.1 1st_1st 0.5 Ia
Pt008221 not found in 250aa AT5G11590.1 1st_1st 0.532558139 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G11590.1     MAEEYY--SLRSERVTQLLVPNSESDSVSDKSKAEQ--------SEKKTKR---GRDSGK
gm009314_Glyma0 ------------MRVS---------------TETEP--------ETKKIKRIRGGGDSSK
pt008221_POPTR_ MSDHHQQNSETESSSTNSLSPASPSSPLSNSTQSKKPLKDQDFSPSKKIKRIR---DSNK
                               :               ::::           ** **     **.*

AT5G11590.1     HPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFP
gm009314_Glyma0 HPLYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGPAAILNFP
pt008221_POPTR_ HPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNPAILNFP
                **:************************************************* .******

AT5G11590.1     ELADSFPRPVSLSPRDIQTAALKAAHMEPTTSFSSSTSSSS-SLSSTSSLESLVLVMDLS
gm009314_Glyma0 HLANSLPRPASLAPRDVQAAAAKAAHMDP------------------SSLSSLVSAMDLS
pt008221_POPTR_ ELANYLPRPASLAPRDVQAAAAKAAQMDQFDQKSETTTTTSPSSSSTSSLTSLVSLMDLS
                .**: :***.**:***:*:** ***:*:                   *** ***  ****

AT5G11590.1     RTESEELGEIVELPSLGASYDVDSANLGNEFVFYDSVDYCLYPPPWGQSSEDNY---GHG
gm009314_Glyma0 -SASDELSQIIELPSL-ESTDDGSVDLKKEFVFVDSLDAWMYQPPFGFDTEQDT---GF-
pt008221_POPTR_ -SQEEELCEIVELPSLETSYD----ELSNDFVYFDSIDEWMYPPPWMQSMENHCCGGGGG
                 : .:** :*:*****  * *    :* ::**: **:*  :* **:  . *:.    *  

AT5G11590.1     IS------PNFGHGLSWDL
gm009314_Glyma0 ------------EGLMWNY
pt008221_POPTR_ CACDDFTLPNE-STVLWDY
                              : *:
BoxShade v3.31 C (beta, 970507) Output
AT5G11590.1     M A E E Y Y - - S L R S E R V T Q L L V P N S E S D S V S D K S K A E Q - - - - - - - - S E K K T K R - - - G R D S G K
gm009314_Glyma0    - - - - - - - - - - - - M R V S - - - - - - - - - - - - - - - T E T E P - - - - - - - - E T K K I K R I R G G G D S S K
pt008221_POPTR_    M S D H H Q Q N S E T E S S S T N S L S P A S P S S P L S N S T Q S K K P L K D Q D F S P S K K I K R I R - - - D S N K
 
AT5G11590.1     H P V Y R G V R M R N W G K W V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G T A A I L N F P
gm009314_Glyma0    H P L Y R G V R M R N W G K W V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G P A A I L N F P
pt008221_POPTR_    H P V Y R G V R M R N W G K W V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G N P A I L N F P
 
AT5G11590.1     E L A D S F P R P V S L S P R D I Q T A A L K A A H M E P T T S F S S S T S S S S - S L S S T S S L E S L V L V M D L S
gm009314_Glyma0    H L A N S L P R P A S L A P R D V Q A A A A K A A H M D P - - - - - - - - - - - - - - - - - - S S L S S L V S A M D L S
pt008221_POPTR_    E L A N Y L P R P A S L A P R D V Q A A A A K A A Q M D Q F D Q K S E T T T T T S P S S S S T S S L T S L V S L M D L S
 
AT5G11590.1     R T E S E E L G E I V E L P S L G A S Y D V D S A N L G N E F V F Y D S V D Y C L Y P P P W G Q S S E D N Y - - - G H G
gm009314_Glyma0    - S A S D E L S Q I I E L P S L - E S T D D G S V D L K K E F V F V D S L D A W M Y Q P P F G F D T E Q D T - - - G F -
pt008221_POPTR_    - S Q E E E L C E I V E L P S L E T S Y D - - - - E L S N D F V Y F D S I D E W M Y P P P W M Q S M E N H C C G G G G G
 
AT5G11590.1     I S - - - - - - P N F G H G L S W D L
gm009314_Glyma0    - - - - - - - - - - - - E G L M W N Y
pt008221_POPTR_    C A C D D F T L P N E - S T V L W D Y
 
0