fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm013469 not found in 184aa AT5G11590.1 1st_1st 0.346511627 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G11590.1     MAEEYYSLRSERVTQLLVPNSESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWG
Sm013469_Selmo1 -------------------------------MEEAKEKPSFGSSGAHHRVYRGVRRRSWG
                                                *::::*.. * ...:* ****** *.**

AT5G11590.1     KWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLS
Sm013469_Selmo1 KWVSEIREPKKKSRIWLGSFPTPEMAARAHDVAALSLKGDAALLNFPESADSLPRPSALS
                *********:********:*****************:** **:***** ***:*** :**

AT5G11590.1     PRDIQTAALKAA------HMEPTTSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELG
Sm013469_Selmo1 PKAIQEAAVAAAFAFVDDHTKNEEFQDTSTASTATTVINYVDEDLVFMM-----------
                *: ** **: **      * :     .:**:*:::   .   *.**::*           

AT5G11590.1     EIVELPSLGASYDVDSANLGNEFVFYDSVDYCLYPPPWGQSSEDNYGHGISPNFGHGLS-
Sm013469_Selmo1 -----PSVMLSHMAQA---------------LLVAPP--------------PMWEGGLSV
                     **:  *: .::                * .**              * :  *** 

AT5G11590.1     -----------WDL------
Sm013469_Selmo1 VEVEVDEEIRLWNFEELNLS
                           *::
BoxShade v3.31 C (beta, 970507) Output
AT5G11590.1     M A E E Y Y S L R S E R V T Q L L V P N S E S D S V S D K S K A E Q S E K K T K R G R D S G K H P V Y R G V R M R N W G
Sm013469_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E E A K E K P S F G S S G A H H R V Y R G V R R R S W G
 
AT5G11590.1     K W V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G T A A I L N F P E L A D S F P R P V S L S
Sm013469_Selmo1    K W V S E I R E P K K K S R I W L G S F P T P E M A A R A H D V A A L S L K G D A A L L N F P E S A D S L P R P S A L S
 
AT5G11590.1     P R D I Q T A A L K A A - - - - - - H M E P T T S F S S S T S S S S S L S S T S S L E S L V L V M D L S R T E S E E L G
Sm013469_Selmo1    P K A I Q E A A V A A A F A F V D D H T K N E E F Q D T S T A S T A T T V I N Y V D E D L V F M M - - - - - - - - - - -
 
AT5G11590.1     E I V E L P S L G A S Y D V D S A N L G N E F V F Y D S V D Y C L Y P P P W G Q S S E D N Y G H G I S P N F G H G L S -
Sm013469_Selmo1    - - - - - P S V M L S H M A Q A - - - - - - - - - - - - - - - L L V A P P - - - - - - - - - - - - - - P M W E G G L S V
 
AT5G11590.1     - - - - - - - - - - - W D L - - - - - -
Sm013469_Selmo1    V E V E V D E E I R L W N F E E L N L S
 
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