fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005791 not found in 257aa AT5G11590.1 not_1st 0.513953488 II
Pt005792 not found in 188aa AT5G11590.1 not_1st 0.439534883 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G11590.1     MAE-EYYSLRSE-RVTQLLVPNSES--DSVSDKSKAEQSE------KKTKRGRDSGKHPV
pt005791_POPTR_ MSDHQQQNLETESSSTKAFSPPSPSSPSSNSNPSKKHQQDQDFSPCKKITRIRDSSKHPV
pt005792_POPTR_ ------------------------------------------------------------
                                                                            

AT5G11590.1     YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELA
pt005791_POPTR_ YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEKAARAHDAAALSIKGNSAILNFPELA
pt005792_POPTR_ -----MRNWGKWVSEIREPRKKSRIWLGTFPTPEKAARAHDAAALSIKGNSAILNFPELA
                     ***************************** ******.*******.:*********

AT5G11590.1     DSFPRPVSLSPRDIQTAALKAAHM---EPTTSFSSSTSSSSSLSSTSSLESLVLVMDLSR
pt005791_POPTR_ NSLPRPASLAPRDVQAAAAKAAQMDNFDQKSETTTTTTASSSSSCTSSLTSLVSLMDLS-
pt005792_POPTR_ NSLPRPASLAPRDVQAAAAKAAQMDNFDQKSETTTTTTASSSSSCTSSLTSLVSLMDLS-
                :*:***.**:***:*:** ***:*   : .:. :::*::*** *.**** *** :**** 

AT5G11590.1     TESEELGEIVELPSLGASYDVDSANLGNEFVFYDSVDYCLYPPPWGQSSED----NYGHG
pt005791_POPTR_ SQDEELSEIVELPSLETSYD----ELNNDFVYSDSVYGWMYPPPWMQSVENICLSGGGVG
pt005792_POPTR_ SQDEELSEIVELPSLETSYD----ELNNDFVYSDSVYGWMYPPPWMQSVENICLSGGGGG
                ::.***.******** :***    :*.*:**: ***   :***** ** *:    . * *

AT5G11590.1     ISPNFGHGL-----------SWDL
pt005791_POPTR_ ENTTTTAGLISILKQAEAFKNW--
pt005792_POPTR_ YACDD----FTLPNESTVLWNY--
                                    .:
BoxShade v3.31 C (beta, 970507) Output
AT5G11590.1     M A E - E Y Y S L R S E - R V T Q L L V P N S E S - - D S V S D K S K A E Q S E - - - - - - K K T K R G R D S G K H P V
pt005791_POPTR_    M S D H Q Q Q N L E T E S S S T K A F S P P S P S S P S S N S N P S K K H Q Q D Q D F S P C K K I T R I R D S S K H P V
pt005792_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G11590.1     Y R G V R M R N W G K W V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G T A A I L N F P E L A
pt005791_POPTR_    Y R G V R M R N W G K W V S E I R E P R K K S R I W L G T F P T P E K A A R A H D A A A L S I K G N S A I L N F P E L A
pt005792_POPTR_    - - - - - M R N W G K W V S E I R E P R K K S R I W L G T F P T P E K A A R A H D A A A L S I K G N S A I L N F P E L A
 
AT5G11590.1     D S F P R P V S L S P R D I Q T A A L K A A H M - - - E P T T S F S S S T S S S S S L S S T S S L E S L V L V M D L S R
pt005791_POPTR_    N S L P R P A S L A P R D V Q A A A A K A A Q M D N F D Q K S E T T T T T T A S S S S S C T S S L T S L V S L M D L S -
pt005792_POPTR_    N S L P R P A S L A P R D V Q A A A A K A A Q M D N F D Q K S E T T T T T T A S S S S S C T S S L T S L V S L M D L S -
 
AT5G11590.1     T E S E E L G E I V E L P S L G A S Y D V D S A N L G N E F V F Y D S V D Y C L Y P P P W G Q S S E D - - - - N Y G H G
pt005791_POPTR_    S Q D E E L S E I V E L P S L E T S Y D - - - - E L N N D F V Y S D S V Y G W M Y P P P W M Q S V E N I C L S G G G V G
pt005792_POPTR_    S Q D E E L S E I V E L P S L E T S Y D - - - - E L N N D F V Y S D S V Y G W M Y P P P W M Q S V E N I C L S G G G G G
 
AT5G11590.1     I S P N F G H G L - - - - - - - - - - - S W D L
pt005791_POPTR_    E N T T T T A G L I S I L K Q A E A F K N W - -
pt005792_POPTR_    Y A C D D - - - - F T L P N E S T V L W N Y - -
 
0