fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029396 not found in 233aa AT5G25810.1 not_not 0.444186046 III
Pt011904 not found in 231aa AT5G25810.1 not_not 0.430232558 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G11590.1     -MAEEYYSLRSERV--TQLLVPNSESDSVSDK-SKAEQSEKKTK-RGRDSGKHPVYRGVR
pt011904_POPTR_ -MNEESTSSSNS----TCNSPPPSLATTITNKLNKQNPIQQSSRSKVRDCSKHPVYRGVR
pt029396_POPTR_ MTKEESSNRSCSSICTTSSSSSSSFATTITNKLKKQNPVDQKSR-KARDCSKHAVYRGVR
                   **  .   .    *    . * : ::::* .* :  ::.:: : **..**.******

AT5G11590.1     MRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPR
pt011904_POPTR_ RRAWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDVAALCIKGDSAILNFPELADSLPR
pt029396_POPTR_ RRAWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDVAALSIKGDSAILNFPELAASLPR
                 * *********:***************************.*** :********* *:**

AT5G11590.1     PVSLSPRDIQTAALKAAHMEPTTSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGE
pt011904_POPTR_ PVSVMPRDIQSAAAKAAAM---VEFNSP-SPSSSLSSS----SVTVSEDVAESEEEYLSE
pt029396_POPTR_ PVSLMPRDIQAAAAKAAAM---VDFNSS-SPPSSLSSS----SVSVSEDVAESEEEYLSE
                ***: *****:** *** *   ..*.*. *..*****:    *: :  *::.:*.* *.*

AT5G11590.1     IVELPSLGASYDV-DSANLGNEFVFYDSVD--YCLYPP--PWGQSSEDNYG--HGISPNF
pt011904_POPTR_ IVELPNIEGSFDSPDQSRI--EFMLFDSVDGHGWVYPPLDLCGEFSDQLLGLESLISSNL
pt029396_POPTR_ IVELPNIEGSFDSPDQSQT--EFMLFDSVD--RWVYPPLDLSGEFCDQLLGLESLIPSNF
                *****.: .*:*  *.:.   **:::****    :***    *: .::  *    *..*:

AT5G11590.1     -GHGLSWDL
pt011904_POPTR_ AGSVLN---
pt029396_POPTR_ GGSELN---
                 *  *.
BoxShade v3.31 C (beta, 970507) Output
AT5G11590.1     - M A E E Y Y S L R S E R V - - T Q L L V P N S E S D S V S D K - S K A E Q S E K K T K - R G R D S G K H P V Y R G V R
pt011904_POPTR_    - M N E E S T S S S N S - - - - T C N S P P P S L A T T I T N K L N K Q N P I Q Q S S R S K V R D C S K H P V Y R G V R
pt029396_POPTR_    M T K E E S S N R S C S S I C T T S S S S S S S F A T T I T N K L K K Q N P V D Q K S R - K A R D C S K H A V Y R G V R
 
AT5G11590.1     M R N W G K W V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G T A A I L N F P E L A D S F P R
pt011904_POPTR_    R R A W G K W V S E I R Q P R K K S R I W L G T F P T P E M A A R A H D V A A L C I K G D S A I L N F P E L A D S L P R
pt029396_POPTR_    R R A W G K W V S E I R Q P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G D S A I L N F P E L A A S L P R
 
AT5G11590.1     P V S L S P R D I Q T A A L K A A H M E P T T S F S S S T S S S S S L S S T S S L E S L V L V M D L S R T E S E E L G E
pt011904_POPTR_    P V S V M P R D I Q S A A A K A A A M - - - V E F N S P - S P S S S L S S S - - - - S V T V S E D V A E S E E E Y L S E
pt029396_POPTR_    P V S L M P R D I Q A A A A K A A A M - - - V D F N S S - S P P S S L S S S - - - - S V S V S E D V A E S E E E Y L S E
 
AT5G11590.1     I V E L P S L G A S Y D V - D S A N L G N E F V F Y D S V D - - Y C L Y P P - - P W G Q S S E D N Y G - - H G I S P N F
pt011904_POPTR_    I V E L P N I E G S F D S P D Q S R I - - E F M L F D S V D G H G W V Y P P L D L C G E F S D Q L L G L E S L I S S N L
pt029396_POPTR_    I V E L P N I E G S F D S P D Q S Q T - - E F M L F D S V D - - R W V Y P P L D L S G E F C D Q L L G L E S L I P S N F
 
AT5G11590.1     - G H G L S W D L
pt011904_POPTR_    A G S V L N - - -
pt029396_POPTR_    G G S E L N - - -
 
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