fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm020101 not found in 242aa AT5G25810.1 not_not 0.423255813 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G11590.1     MAEEYYSLRSERVTQLLVPNSESDSVSDKSKAEQS---------EKKTKRGRD-SGKHPV
gm020101_Glyma0 MAE--------------LPSSEASSSSASSRKHSSSEAHLPAPDQKRPKQARDSSSKHPV
                ***              :*.**:.* * .*: ..*         :*:.*:.** *.****

AT5G11590.1     YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELA
gm020101_Glyma0 FRGVRMRAWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALAIKGNSAILNFPELA
                :****** **************.*******.*.************:***.:*********

AT5G11590.1     DSFPRPVSLSPRDIQTAALKAAHME----PTTSFSSSTSSSSSLSSTSSLESLVLVMDLS
gm020101_Glyma0 ASLPRPDSNSPRDVQAAAAKAAAMEVNDVPTTPSSSSSSASLSLSQSSSWSSLAVSSSSG
                 *:*** * ****:*:** *** **    ***. ***:*:* ***.:** .**.:  . .

AT5G11590.1     RTES--EELGEIVELPSLGASYDVDSANLGNEFVFYDSVDYCLYPPPWGQSSEDNYGHGI
gm020101_Glyma0 DGPSTPEELGEIVELPSLGTSFEIPDPS--GELVYLD-------PWPYSQA----WSHGI
                   *  *************:*::: ...  .*:*: *       * *:.*:    :.***

AT5G11590.1     ---SPNFGHGLS--------------WDL
gm020101_Glyma0 YDESEGYFIGDSETESMILCGFEGSLWQH
                   * .:  * *              *:
BoxShade v3.31 C (beta, 970507) Output
AT5G11590.1     M A E E Y Y S L R S E R V T Q L L V P N S E S D S V S D K S K A E Q S - - - - - - - - - E K K T K R G R D - S G K H P V
gm020101_Glyma0    M A E - - - - - - - - - - - - - - L P S S E A S S S S A S S R K H S S S E A H L P A P D Q K R P K Q A R D S S S K H P V
 
AT5G11590.1     Y R G V R M R N W G K W V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G T A A I L N F P E L A
gm020101_Glyma0    F R G V R M R A W G K W V S E I R E P R K K N R I W L G T F A T A E M A A R A H D V A A L A I K G N S A I L N F P E L A
 
AT5G11590.1     D S F P R P V S L S P R D I Q T A A L K A A H M E - - - - P T T S F S S S T S S S S S L S S T S S L E S L V L V M D L S
gm020101_Glyma0    A S L P R P D S N S P R D V Q A A A A K A A A M E V N D V P T T P S S S S S S A S L S L S Q S S S W S S L A V S S S S G
 
AT5G11590.1     R T E S - - E E L G E I V E L P S L G A S Y D V D S A N L G N E F V F Y D S V D Y C L Y P P P W G Q S S E D N Y G H G I
gm020101_Glyma0    D G P S T P E E L G E I V E L P S L G T S F E I P D P S - - G E L V Y L D - - - - - - - P W P Y S Q A - - - - W S H G I
 
AT5G11590.1     - - - S P N F G H G L S - - - - - - - - - - - - - - W D L
gm020101_Glyma0    Y D E S E G Y F I G D S E T E S M I L C G F E G S L W Q H
 
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