fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G11590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009314 not found in 188aa AT5G11590.1 1st_1st 0.5 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G11590.1     MAEEYYSLRSERVTQLLVPNSESDSVSDKSKAEQSEKKTKR---GRDSGKHPVYRGVRMR
gm009314_Glyma0 ----------MRVS---------------TETEPETKKIKRIRGGGDSSKHPLYRGVRMR
                           **:               :::* . ** **   * **.***:*******

AT5G11590.1     NWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPV
gm009314_Glyma0 NWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGPAAILNFPHLANSLPRPA
                ******************************************.*******.**:*:***.

AT5G11590.1     SLSPRDIQTAALKAAHMEPTTSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIV
gm009314_Glyma0 SLAPRDVQAAAAKAAHMDP-----------------SSLSSLVSAMDLS-SASDELSQII
                **:***:*:** *****:*                 ***.*** .**** : *:**.:*:

AT5G11590.1     ELPSLGASYDVDSANLGNEFVFYDSVDYCLYPPPWGQSSEDNYGHGISPNFGHGLSWDL
gm009314_Glyma0 ELPSL-ESTDDGSVDLKKEFVFVDSLDAWMYQPPFGFDTEQDTGF-------EGLMWNY
                *****  * * .*.:* :**** **:*  :* **:* .:*:: *.       .** *:
BoxShade v3.31 C (beta, 970507) Output
AT5G11590.1     M A E E Y Y S L R S E R V T Q L L V P N S E S D S V S D K S K A E Q S E K K T K R - - - G R D S G K H P V Y R G V R M R
gm009314_Glyma0    - - - - - - - - - - M R V S - - - - - - - - - - - - - - - T E T E P E T K K I K R I R G G G D S S K H P L Y R G V R M R
 
AT5G11590.1     N W G K W V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G T A A I L N F P E L A D S F P R P V
gm009314_Glyma0    N W G K W V S E I R E P R K K S R I W L G T F P T P E M A A R A H D V A A L S I K G P A A I L N F P H L A N S L P R P A
 
AT5G11590.1     S L S P R D I Q T A A L K A A H M E P T T S F S S S T S S S S S L S S T S S L E S L V L V M D L S R T E S E E L G E I V
gm009314_Glyma0    S L A P R D V Q A A A A K A A H M D P - - - - - - - - - - - - - - - - - S S L S S L V S A M D L S - S A S D E L S Q I I
 
AT5G11590.1     E L P S L G A S Y D V D S A N L G N E F V F Y D S V D Y C L Y P P P W G Q S S E D N Y G H G I S P N F G H G L S W D L
gm009314_Glyma0    E L P S L - E S T D D G S V D L K K E F V F V D S L D A W M Y Q P P F G F D T E Q D T G F - - - - - - - E G L M W N Y
 
0