fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G12840.3 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm023267 not found in 336aa AT5G12840.4 1st_not 0.475 II
Pt030983 not found in 348aa AT5G12840.4 1st_not 0.408333333 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G12840.3     MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S
gm023267_Glyma0 MQSKSETANRLR-SDPHSFQPGGVYSEPWWRGIGYNPMAQTMAGANASNSSSLECPNGDS
pt030983_POPTR_ MRSKPENTNGLD-ADLKDIEY-TVNSEPWWRNIGYSSIPPAMTGGNASNLTTPEGHNG-S
                *:**.   *     : : .:   : :****:. .:. :. : ... .** :: :  ** *

AT5G12840.3     ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVD-------NHGMEGNDPALSIRNMHD
gm023267_Glyma0 ESNEEGQSLSNSGMNEEDDDATKDSKPAAPNETGN---YEQEQQGMQ--HTASSPPSMRE
pt030983_POPTR_ ESNDD-QSLSSGRLNEEDADANKDSQATASSQLGNGLHY----QNLQ--SVVSS-MTRTH
                ***:  .: ... :* *: .: ***:.::...  :        :.::    . *  .  .

AT5G12840.3     QPLVQPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMA
gm023267_Glyma0 ECLTQTPQLELVGHSIACSTNPYQDPYYGGMMAAYGHQQLGYAPFIGMPHARMPLPLEMA
pt030983_POPTR_ DGLSQSPQFELVSHSIACASNPYQDAYYSGMM-AYGHQPLGYPHFVGMPHARMLLPLEVA
                : * *.*  ***.* *** .*****.**.*:* ***** **:  ::***: *  ***::*

AT5G12840.3     QEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKK
gm023267_Glyma0 QEPVYVNAKQYQGILRRRQARAKAELERKLIKSRKPYLHESRHQHAMRRARGTGGRFAKK
pt030983_POPTR_ QEPVYVNAKQYPGIIRRRQQRAKAEVEKKLIKSRKPYLHESRHQHAIRRERSSGGRFAKK
                *********** **:***: *****:*:*:*:.**********:**:** *.:*******

AT5G12840.3     SEVEAGEDAG-----GRDRERG-SATNSSGSEQVETDSNETLNSSGAP------------
gm023267_Glyma0 TDGEGSNHLGKEKDNGTDSV---QSISSSGSEPLHSDSAETWNSPNMQQDARASKVHNSR
pt030983_POPTR_ SGDDASKNTSERKLNGSGPLRASQSGSSSGSEPFSSDSVETLKSSDGQKEARASQVHDT-
                :  :..:. .     * .     .: .***** . :** ** :*..              

AT5G12840.3     ------------------------------------------------------------
gm023267_Glyma0 FEAPSYQNGSGSYHNHNGLQSSVY-----HSSSGERV---EERDCSGQQLNHN-------
pt030983_POPTR_ FEAYGYANRDGHYQNHHGLQSSTYGLYLGENKDGDRSRENEDEDHPGRQLRKQAKTSSAH
                                                                            

AT5G12840.3     -
gm023267_Glyma0 -
pt030983_POPTR_ Q
BoxShade v3.31 C (beta, 970507) Output
AT5G12840.3     M Q S K P G R E N E E E V N N H H A V Q Q P M M Y A E P W W K N N S F G V V P Q A R P S G I P S N S S S L D C P N G - S
gm023267_Glyma0    M Q S K S E T A N R L R - S D P H S F Q P G G V Y S E P W W R G I G Y N P M A Q T M A G A N A S N S S S L E C P N G D S
pt030983_POPTR_    M R S K P E N T N G L D - A D L K D I E Y - T V N S E P W W R N I G Y S S I P P A M T G G N A S N L T T P E G H N G - S
 
AT5G12840.3     E S N D V H S A S E D G A L N G E N D G T W K D S Q A A T S S R S V D - - - - - - - N H G M E G N D P A L S I R N M H D
gm023267_Glyma0    E S N E E G Q S L S N S G M N E E D D D A T K D S K P A A P N E T G N - - - Y E Q E Q Q G M Q - - H T A S S P P S M R E
pt030983_POPTR_    E S N D D - Q S L S S G R L N E E D A D A N K D S Q A T A S S Q L G N G L H Y - - - - Q N L Q - - S V V S S - M T R T H
 
AT5G12840.3     Q P L V Q P P - - E L V G H Y I A C V P N P Y Q D P Y Y G G L M G A Y G H Q Q L G F R P Y L G M P R E R T A L P L D M A
gm023267_Glyma0    E C L T Q T P Q L E L V G H S I A C S T N P Y Q D P Y Y G G M M A A Y G H Q Q L G Y A P F I G M P H A R M P L P L E M A
pt030983_POPTR_    D G L S Q S P Q F E L V S H S I A C A S N P Y Q D A Y Y S G M M - A Y G H Q P L G Y P H F V G M P H A R M L L P L E V A
 
AT5G12840.3     Q E P V Y V N A K Q Y E G I L R R R K A R A K A E L E R K V I R D R K P Y L H E S R H K H A M R R A R A S G G R F A K K
gm023267_Glyma0    Q E P V Y V N A K Q Y Q G I L R R R Q A R A K A E L E R K L I K S R K P Y L H E S R H Q H A M R R A R G T G G R F A K K
pt030983_POPTR_    Q E P V Y V N A K Q Y P G I I R R R Q Q R A K A E V E K K L I K S R K P Y L H E S R H Q H A I R R E R S S G G R F A K K
 
AT5G12840.3     S E V E A G E D A G - - - - - G R D R E R G - S A T N S S G S E Q V E T D S N E T L N S S G A P - - - - - - - - - - - -
gm023267_Glyma0    T D G E G S N H L G K E K D N G T D S V - - - Q S I S S S G S E P L H S D S A E T W N S P N M Q Q D A R A S K V H N S R
pt030983_POPTR_    S G D D A S K N T S E R K L N G S G P L R A S Q S G S S S G S E P F S S D S V E T L K S S D G Q K E A R A S Q V H D T -
 
AT5G12840.3     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm023267_Glyma0    F E A P S Y Q N G S G S Y H N H N G L Q S S V Y - - - - - H S S S G E R V - - - E E R D C S G Q Q L N H N - - - - - - -
pt030983_POPTR_    F E A Y G Y A N R D G H Y Q N H H G L Q S S T Y G L Y L G E N K D G D R S R E N E D E D H P G R Q L R K Q A K T S S A H
 
AT5G12840.3     -
gm023267_Glyma0    -
pt030983_POPTR_    Q
 
0