fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G12840.3 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm023267 not found in 336aa AT5G12840.4 1st_not 0.475 II
Gm048890 not found in 354aa AT5G12840.4 not_not 0.44375 III
Pt030983 not found in 348aa AT5G12840.4 1st_not 0.408333333 II
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CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G12840.3     ----------MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNS
gm048890_Glyma1 MKVVSVGSEDMQSKSETANRLR-SDPHSFQPGSVYSEPWWRGIGYNPVAQTMAGANASNS
gm023267_Glyma0 ----------MQSKSETANRLR-SDPHSFQPGGVYSEPWWRGIGYNPMAQTMAGANASNS
pt030983_POPTR_ ----------MRSKPENTNGLD-ADLKDIEY-TVNSEPWWRNIGYSSIPPAMTGGNASNL
                          *:**.   *     : : .:   : :****:. .:. :. : ... .** 

AT5G12840.3     SSLDCPNG-SESNDVHSASEDGALNGENDGTWKDSQAA----TSSRSVDNHGMEGNDPAL
gm048890_Glyma1 SSLECPNGDSESNEE----------------------------GNYGQEQQGMQHT--AS
gm023267_Glyma0 SSLECPNGDSESNEEGQSLSNSGMNEEDDDATKDSKPAAPNETGNYEQEQQGMQHT--AS
pt030983_POPTR_ TTPEGHNG-SESNDD-QSLSSGRLNEEDADANKDSQATASSQLGN-GLHYQNLQSV--VS
                :: :  ** ****:                             ..   . :.::    . 

AT5G12840.3     SIRNMHDQPLVQPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERT
gm048890_Glyma1 SAPSMREECLTQTPQLELVGHSIACATNPYQDPYYGGMMAAYGHQQLGYAPFIGMPHARM
gm023267_Glyma0 SPPSMREECLTQTPQLELVGHSIACSTNPYQDPYYGGMMAAYGHQQLGYAPFIGMPHARM
pt030983_POPTR_ SMTRTHDG-LSQSPQFELVSHSIACASNPYQDAYYSGMM-AYGHQPLGYPHFVGMPHARM
                *    ::  * *.*  ***.* *** .*****.**.*:* ***** **:  ::***: * 

AT5G12840.3     ALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARAS
gm048890_Glyma1 PLPLEMAQEPVYVNAKQYQGILRRRQARAKAELERKLIKSRKPYLHESRHQHAMRRARGT
gm023267_Glyma0 PLPLEMAQEPVYVNAKQYQGILRRRQARAKAELERKLIKSRKPYLHESRHQHAMRRARGT
pt030983_POPTR_ LLPLEVAQEPVYVNAKQYPGIIRRRQQRAKAEVEKKLIKSRKPYLHESRHQHAIRRERSS
                 ***::************ **:***: *****:*:*:*:.**********:**:** *.:

AT5G12840.3     GGRFAKKSEVEAGEDAGGRDRERG-------SATNSSGSEQVETDSNETLNS--------
gm048890_Glyma1 GGRFAKKTDGE-GSNHSGKEKDNGTDSVLSSQSISSSGSEPLHSDSAETWNSPNMQQDAR
gm023267_Glyma0 GGRFAKKTDGE-GSNHLGKEKDNGTDSV---QSISSSGSEPLHSDSAETWNSPNMQQDAR
pt030983_POPTR_ GGRFAKKSGDD-ASKNTSERKLNGSGPLRASQSGSSSGSEPFSSDSVETLKSSDGQKEAR
                *******:  : ...  .. : .*       .: .***** . :** ** :*        

AT5G12840.3     ------------------------------------------------------------
gm048890_Glyma1 ASKCTIHP---QVKDWRKGIVRRPRLVCIQVTYLVNTLVICKHSWQYICQAANHSWLCSC
gm023267_Glyma0 ASK--VHNSRFEAPSYQNG------------------------SGSY----HNHNGLQSS
pt030983_POPTR_ ASQ--VHDT-FEAYGYANR------------------------DGHY----QNHHGLQSS
                                                                            

AT5G12840.3     ------------SGAP--------------------------
gm048890_Glyma1 VCGVNDYYGGGWGGGGMIDA--------R-LSLKVVSS----
gm023267_Glyma0 V-----YHS---SSGERVEE--------RDCSGQQLNHN---
pt030983_POPTR_ TYGL--YLGEN-KDGDRSRENEDEDHPGRQLRKQAKTSSAHQ
                             ..
BoxShade v3.31 C (beta, 970507) Output
AT5G12840.3     - - - - - - - - - - M Q S K P G R E N E E E V N N H H A V Q Q P M M Y A E P W W K N N S F G V V P Q A R P S G I P S N S
gm048890_Glyma1    M K V V S V G S E D M Q S K S E T A N R L R - S D P H S F Q P G S V Y S E P W W R G I G Y N P V A Q T M A G A N A S N S
gm023267_Glyma0    - - - - - - - - - - M Q S K S E T A N R L R - S D P H S F Q P G G V Y S E P W W R G I G Y N P M A Q T M A G A N A S N S
pt030983_POPTR_    - - - - - - - - - - M R S K P E N T N G L D - A D L K D I E Y - T V N S E P W W R N I G Y S S I P P A M T G G N A S N L
 
AT5G12840.3     S S L D C P N G - S E S N D V H S A S E D G A L N G E N D G T W K D S Q A A - - - - T S S R S V D N H G M E G N D P A L
gm048890_Glyma1    S S L E C P N G D S E S N E E - - - - - - - - - - - - - - - - - - - - - - - - - - - - G N Y G Q E Q Q G M Q H T - - A S
gm023267_Glyma0    S S L E C P N G D S E S N E E G Q S L S N S G M N E E D D D A T K D S K P A A P N E T G N Y E Q E Q Q G M Q H T - - A S
pt030983_POPTR_    T T P E G H N G - S E S N D D - Q S L S S G R L N E E D A D A N K D S Q A T A S S Q L G N - G L H Y Q N L Q S V - - V S
 
AT5G12840.3     S I R N M H D Q P L V Q P P - - E L V G H Y I A C V P N P Y Q D P Y Y G G L M G A Y G H Q Q L G F R P Y L G M P R E R T
gm048890_Glyma1    S A P S M R E E C L T Q T P Q L E L V G H S I A C A T N P Y Q D P Y Y G G M M A A Y G H Q Q L G Y A P F I G M P H A R M
gm023267_Glyma0    S P P S M R E E C L T Q T P Q L E L V G H S I A C S T N P Y Q D P Y Y G G M M A A Y G H Q Q L G Y A P F I G M P H A R M
pt030983_POPTR_    S M T R T H D G - L S Q S P Q F E L V S H S I A C A S N P Y Q D A Y Y S G M M - A Y G H Q P L G Y P H F V G M P H A R M
 
AT5G12840.3     A L P L D M A Q E P V Y V N A K Q Y E G I L R R R K A R A K A E L E R K V I R D R K P Y L H E S R H K H A M R R A R A S
gm048890_Glyma1    P L P L E M A Q E P V Y V N A K Q Y Q G I L R R R Q A R A K A E L E R K L I K S R K P Y L H E S R H Q H A M R R A R G T
gm023267_Glyma0    P L P L E M A Q E P V Y V N A K Q Y Q G I L R R R Q A R A K A E L E R K L I K S R K P Y L H E S R H Q H A M R R A R G T
pt030983_POPTR_    L L P L E V A Q E P V Y V N A K Q Y P G I I R R R Q Q R A K A E V E K K L I K S R K P Y L H E S R H Q H A I R R E R S S
 
AT5G12840.3     G G R F A K K S E V E A G E D A G G R D R E R G - - - - - - - S A T N S S G S E Q V E T D S N E T L N S - - - - - - - -
gm048890_Glyma1    G G R F A K K T D G E - G S N H S G K E K D N G T D S V L S S Q S I S S S G S E P L H S D S A E T W N S P N M Q Q D A R
gm023267_Glyma0    G G R F A K K T D G E - G S N H L G K E K D N G T D S V - - - Q S I S S S G S E P L H S D S A E T W N S P N M Q Q D A R
pt030983_POPTR_    G G R F A K K S G D D - A S K N T S E R K L N G S G P L R A S Q S G S S S G S E P F S S D S V E T L K S S D G Q K E A R
 
AT5G12840.3     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm048890_Glyma1    A S K C T I H P - - - Q V K D W R K G I V R R P R L V C I Q V T Y L V N T L V I C K H S W Q Y I C Q A A N H S W L C S C
gm023267_Glyma0    A S K - - V H N S R F E A P S Y Q N G - - - - - - - - - - - - - - - - - - - - - - - - S G S Y - - - - H N H N G L Q S S
pt030983_POPTR_    A S Q - - V H D T - F E A Y G Y A N R - - - - - - - - - - - - - - - - - - - - - - - - D G H Y - - - - Q N H H G L Q S S
 
AT5G12840.3     - - - - - - - - - - - - S G A P - - - - - - - - - - - - - - - - - - - - - - - - - -
gm048890_Glyma1    V C G V N D Y Y G G G W G G G G M I D A - - - - - - - - R - L S L K V V S S - - - -
gm023267_Glyma0    V - - - - - Y H S - - - S S G E R V E E - - - - - - - - R D C S G Q Q L N H N - - -
pt030983_POPTR_    T Y G L - - Y L G E N - K D G D R S R E N E D E D H P G R Q L R K Q A K T S S A H Q
 
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