fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G12840.3 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030983 not found in 348aa AT5G12840.4 1st_not 0.408333333 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G12840.3     MQSKPGRENEEEVNNHHAVQQPMMY---AEPWWKNNSFGVVPQARPSGIPSNSSSLDCPN
pt030983_POPTR_ MRSKP-----ENTNGLDADLKDIEYTVNSEPWWRNIGYSSIPPAMTGGNASNLTTPEGHN
                *:***     *:.*. .*  : : *   :****:* .:. :* * ..* .** :: :  *

AT5G12840.3     GSESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDN-HGMEGNDPALSIRNMHDQPLV
pt030983_POPTR_ GSESNDDQSLSS-GRLNEEDADANKDSQATASSQLGNGLHYQNLQSVVSSMTRTHDG-LS
                ****** :* *. * ** *: .: *****::**:  :. *  : :. . *: . **  * 

AT5G12840.3     QPP--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPV
pt030983_POPTR_ QSPQFELVSHSIACASNPYQDAYYSGMM-AYGHQPLGYPHFVGMPHARMLLPLEVAQEPV
                *.*  ***.* ***..*****.**.*:* ***** **:  ::***: *  ***::*****

AT5G12840.3     YVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVE
pt030983_POPTR_ YVNAKQYPGIIRRRQQRAKAEVEKKLIKSRKPYLHESRHQHAIRRERSSGGRFAKKS---
                ******* **:***: *****:*:*:*:.**********:**:** *:*********   

AT5G12840.3     AGEDAGGRDRER---GS-------ATNSSGSEQVETDSNETLNSSGAP------------
pt030983_POPTR_ -GDDASKNTSERKLNGSGPLRASQSGSSSGSEPFSSDSVETLKSSDGQKEARASQVHDTF
                 *:**. .  **   **       : .***** ..:** ***:**..             

AT5G12840.3     ------------------------------------------------------------
pt030983_POPTR_ EAYGYANRDGHYQNHHGLQSSTYGLYLGENKDGDRSRENEDEDHPGRQLRKQAKTSSAHQ
BoxShade v3.31 C (beta, 970507) Output
AT5G12840.3     M Q S K P G R E N E E E V N N H H A V Q Q P M M Y - - - A E P W W K N N S F G V V P Q A R P S G I P S N S S S L D C P N
pt030983_POPTR_    M R S K P - - - - - E N T N G L D A D L K D I E Y T V N S E P W W R N I G Y S S I P P A M T G G N A S N L T T P E G H N
 
AT5G12840.3     G S E S N D V H S A S E D G A L N G E N D G T W K D S Q A A T S S R S V D N - H G M E G N D P A L S I R N M H D Q P L V
pt030983_POPTR_    G S E S N D D Q S L S S - G R L N E E D A D A N K D S Q A T A S S Q L G N G L H Y Q N L Q S V V S S M T R T H D G - L S
 
AT5G12840.3     Q P P - - E L V G H Y I A C V P N P Y Q D P Y Y G G L M G A Y G H Q Q L G F R P Y L G M P R E R T A L P L D M A Q E P V
pt030983_POPTR_    Q S P Q F E L V S H S I A C A S N P Y Q D A Y Y S G M M - A Y G H Q P L G Y P H F V G M P H A R M L L P L E V A Q E P V
 
AT5G12840.3     Y V N A K Q Y E G I L R R R K A R A K A E L E R K V I R D R K P Y L H E S R H K H A M R R A R A S G G R F A K K S E V E
pt030983_POPTR_    Y V N A K Q Y P G I I R R R Q Q R A K A E V E K K L I K S R K P Y L H E S R H Q H A I R R E R S S G G R F A K K S - - -
 
AT5G12840.3     A G E D A G G R D R E R - - - G S - - - - - - - A T N S S G S E Q V E T D S N E T L N S S G A P - - - - - - - - - - - -
pt030983_POPTR_    - G D D A S K N T S E R K L N G S G P L R A S Q S G S S S G S E P F S S D S V E T L K S S D G Q K E A R A S Q V H D T F
 
AT5G12840.3     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt030983_POPTR_    E A Y G Y A N R D G H Y Q N H H G L Q S S T Y G L Y L G E N K D G D R S R E N E D E D H P G R Q L R K Q A K T S S A H Q
 
0