fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G12870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm032872 not found in 276aa AT5G12870.1 not_1st 0.431261770 II
Gm030824 not found in 295aa AT5G12870.1 not_1st 0.421845574 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G12870.1     MRKPEVAI--AASTHQVKKMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKS
gm030824_Glyma1 MRKPEVSG---KNNNINNKLRKGLWSPEEDDKLMNYMLNSGQGCWSDVARNAGLQRCGKS
gm032872_Glyma1 MRKPEVSGNNNNNNNINNKLRKGLWSPEEDDKLMNYMLNSGQGCWSDVARNAGLQRCGKS
                ******:     ..:  :*::*********.***:***..*********:**********

AT5G12870.1     CRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTI
gm030824_Glyma1 CRLRWINYLRPDLKRGAFSPQEEEIIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTI
gm032872_Glyma1 CRLRWINYLRPDLKRGAFSQQEEELIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTI
                ******************* ***::**::**:****************************

AT5G12870.1     KKRLKKM-SDTSNLINNSSSSPNT-----ASDSSSNSASSLDIKDIIGSFMSLQEQGFVN
gm030824_Glyma1 KKRLKNLSSNTSPNGSESSYEPNNKDLNMAGFTTSNTQQNQQHAD----FMPM-------
gm032872_Glyma1 KKRLKNMSSNTSPNGSESSYEPNNRDLNMAGFTTSNT-QDQQHAD----FMPMFNSSSQS
                *****:: *:**   .:** .**.     *. ::**: .. :  *    **.:       

AT5G12870.1     PSLTHIQTNNP---FPTGNMISHPCNDDFT-PYVD----------GIYG-VNAGVQGELY
gm030824_Glyma1 --------------LP---MLEHGLNMTSSGGFFNSKGPCFSSSQRVFGSVNIGAEGDMY
gm032872_Glyma1 PSMHAMVLNSIIDRLP---MLEHGLNMPCS---VDNKG-IYLENGGVFGSVNIGAEGDVY
                              :*   *:.*  *   :   .:           ::* ** *.:*::*

AT5G12870.1     FPPLE--CEEGDWYNANI----------NNHLDELNT------------------NGSGN
gm030824_Glyma1 VPPLESVSTTSDHYNLKLESTCNTDTNNSNYFDDINSIILNNCNINNSNNIKRAENRAGG
gm032872_Glyma1 VPPLESVSTTSDH-NLK-----------GWWGGEFVSGRVNHWRVG-----------LGG
                .****  .  .*  * :           .   .:: :                     *.

AT5G12870.1     APEGMRPVEEF---WDLDQLMNTEVPSFYFNFKQSI
gm030824_Glyma1 V-ENLFQEELTIGEWDLEELMK-DVSSF--------
gm032872_Glyma1 VNERCFILSLS-------------------------
                . *     .
BoxShade v3.31 C (beta, 970507) Output
AT5G12870.1     M R K P E V A I - - A A S T H Q V K K M K K G L W S P E E D S K L M Q Y M L S N G Q G C W S D V A K N A G L Q R C G K S
gm030824_Glyma1    M R K P E V S G - - - K N N N I N N K L R K G L W S P E E D D K L M N Y M L N S G Q G C W S D V A R N A G L Q R C G K S
gm032872_Glyma1    M R K P E V S G N N N N N N N I N N K L R K G L W S P E E D D K L M N Y M L N S G Q G C W S D V A R N A G L Q R C G K S
 
AT5G12870.1     C R L R W I N Y L R P D L K R G A F S P Q E E D L I I R F H S I L G N R W S Q I A A R L P G R T D N E I K N F W N S T I
gm030824_Glyma1    C R L R W I N Y L R P D L K R G A F S P Q E E E I I I H L H S L L G N R W S Q I A A R L P G R T D N E I K N F W N S T I
gm032872_Glyma1    C R L R W I N Y L R P D L K R G A F S Q Q E E E L I I H L H S L L G N R W S Q I A A R L P G R T D N E I K N F W N S T I
 
AT5G12870.1     K K R L K K M - S D T S N L I N N S S S S P N T - - - - - A S D S S S N S A S S L D I K D I I G S F M S L Q E Q G F V N
gm030824_Glyma1    K K R L K N L S S N T S P N G S E S S Y E P N N K D L N M A G F T T S N T Q Q N Q Q H A D - - - - F M P M - - - - - - -
gm032872_Glyma1    K K R L K N M S S N T S P N G S E S S Y E P N N R D L N M A G F T T S N T - Q D Q Q H A D - - - - F M P M F N S S S Q S
 
AT5G12870.1     P S L T H I Q T N N P - - - F P T G N M I S H P C N D D F T - P Y V D - - - - - - - - - - G I Y G - V N A G V Q G E L Y
gm030824_Glyma1    - - - - - - - - - - - - - - L P - - - M L E H G L N M T S S G G F F N S K G P C F S S S Q R V F G S V N I G A E G D M Y
gm032872_Glyma1    P S M H A M V L N S I I D R L P - - - M L E H G L N M P C S - - - V D N K G - I Y L E N G G V F G S V N I G A E G D V Y
 
AT5G12870.1     F P P L E - - C E E G D W Y N A N I - - - - - - - - - - N N H L D E L N T - - - - - - - - - - - - - - - - - - N G S G N
gm030824_Glyma1    V P P L E S V S T T S D H Y N L K L E S T C N T D T N N S N Y F D D I N S I I L N N C N I N N S N N I K R A E N R A G G
gm032872_Glyma1    V P P L E S V S T T S D H - N L K - - - - - - - - - - - G W W G G E F V S G R V N H W R V G - - - - - - - - - - - L G G
 
AT5G12870.1     A P E G M R P V E E F - - - W D L D Q L M N T E V P S F Y F N F K Q S I
gm030824_Glyma1    V - E N L F Q E E L T I G E W D L E E L M K - D V S S F - - - - - - - -
gm032872_Glyma1    V N E R C F I L S L S - - - - - - - - - - - - - - - - - - - - - - - - -
 
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