fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G12870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034611 not found in 315aa AT3G08500.1 not_not 0.403013182 III
Pt022066 not found in 321aa AT3G08500.1 not_not 0.433145009 III
Pt021169 not found in 333aa AT3G08500.1 not_not 0.401129943 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G12870.1     MRKPEVAI-AAST---HQV--KKMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQR
pt022066_POPTR_ MRKPEASG-KNNV---NNI--NKFRKGLWSPEEDDKLMNYMLNNGQGCWSDVARNAGLQR
gm034611_Glyma1 MRKPDLMANKDKM---NNI-KSKLRKGLWSPDEDERLVRYMLTNGQGCWSDIARNAGLQR
pt021169_POPTR_ MRKPDLVG-KDRVPSNSSINKAKLRKGLWSPEEDEKLIKYMLTNGQGCWSDIARNAGLQR
                ****:            .:   *::******:**.:*:.***.********:*:******

AT5G12870.1     CGKSCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFW
pt022066_POPTR_ CGKSCRLRWINYLRPDLKRGAFSPQEEEMIIHLHSLLGNRWSQIAARLPGRTDNEIKNFW
gm034611_Glyma1 CGKSCRLRWINYLRPDLKRGAFSPQEEDLIVHLHSILGNRWSQIAARLPGRTDNEIKNFW
pt021169_POPTR_ CGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHTILGNRWSQIAARLPGRTDNEIKNFW
                ***************************::*:::*::************************

AT5G12870.1     NSTIKKRLKKMSDTSNLINNSSSSPNTASDSSSNSASSLDIKDIIGSFMSL-QEQGFVNP
pt022066_POPTR_ NSTIKKRLKNL-------QSSNASPNTSDSSSEPS------KDVMGGLMSTMQEQGIFSM
gm034611_Glyma1 NSTLKKRLKTN-------TSTPSLNNSTG-SSESN------KDVLSGIMPF-NEHDIMTM
pt021169_POPTR_ NSTLKKRLKIN-------NTSTSSPNDSD-SSEPR------DHAIGNIMPT-HDPDTMTL
                ***:*****          .: :  * :. **.        .. :..:*.  :: . .. 

AT5G12870.1     SLT---HIQTNNPFPTGNMISHPCNDDFTPYVD---------------------------
pt022066_POPTR_ NMDPSMSSSSSLATSMKAMILNTMMDPLLPMLDYDHGLNMYGGASGYESITAPPCMAQVG
gm034611_Glyma1 CMD----SSSSIS-SMQAMVLPDQFDPFF-MLA-NNQCDMTNVSSDFSNM-PAACLTQIG
pt021169_POPTR_ CMD----SSSSSSISMQGMITSNRFDSFS-ML--NNRYDVTGAASLFDM---STCLTQVG
                 :      .:. . .   *:     * :   :                            

AT5G12870.1     -------GIYGVNAGV---------QGELYFPPLEC---EEGDW----------YNANIN
pt022066_POPTR_ VLNSGDHGFYGE--GIFEG-------INVEIPPLES-NIQDNNT------DKYSYSSPVN
gm034611_Glyma1 MVD----GHQGN-YGILEP-NKMGSGIDFSLPSLESRSIESNSV----PIDVKS----HN
pt021169_POPTR_ MGD----GFYGDHYGILEANNKTGLESDLSLPPLESRSFEENNTVSNNRIGMKSSSNNNN
                       *  *   *:           :. :*.**.   :...                *

AT5G12870.1     NHLDELNTNGS------------------GNAPEG---MRPVEEFWDLDQLMNTEVPSF-
pt022066_POPTR_ SLYHKNCNITS---NNKTDSIAADQM---GNLWHGSEELKVGE--WDLEELMK-DVSAFP
gm034611_Glyma1 NHFNYGSFKNT----DKIQGSKVEDLIGFGNHGQG-ENLKMGE--WDLENLMQ-DITSFP
pt021169_POPTR_ NCFDNTCFDNTCFNNNTDQRFKVEDMLGLENHWQG-ENLRMGE--WDFEGLME-NITSFP
                .  .      :                   *  .*   ::  *  **:: **: ::.:* 

AT5G12870.1     YFNFKQSI
pt022066_POPTR_ FLDFQ---
gm034611_Glyma1 FLDF----
pt021169_POPTR_ LLDFHVE-
                 ::*
BoxShade v3.31 C (beta, 970507) Output
AT5G12870.1     M R K P E V A I - A A S T - - - H Q V - - K K M K K G L W S P E E D S K L M Q Y M L S N G Q G C W S D V A K N A G L Q R
pt022066_POPTR_    M R K P E A S G - K N N V - - - N N I - - N K F R K G L W S P E E D D K L M N Y M L N N G Q G C W S D V A R N A G L Q R
gm034611_Glyma1    M R K P D L M A N K D K M - - - N N I - K S K L R K G L W S P D E D E R L V R Y M L T N G Q G C W S D I A R N A G L Q R
pt021169_POPTR_    M R K P D L V G - K D R V P S N S S I N K A K L R K G L W S P E E D E K L I K Y M L T N G Q G C W S D I A R N A G L Q R
 
AT5G12870.1     C G K S C R L R W I N Y L R P D L K R G A F S P Q E E D L I I R F H S I L G N R W S Q I A A R L P G R T D N E I K N F W
pt022066_POPTR_    C G K S C R L R W I N Y L R P D L K R G A F S P Q E E E M I I H L H S L L G N R W S Q I A A R L P G R T D N E I K N F W
gm034611_Glyma1    C G K S C R L R W I N Y L R P D L K R G A F S P Q E E D L I V H L H S I L G N R W S Q I A A R L P G R T D N E I K N F W
pt021169_POPTR_    C G K S C R L R W I N Y L R P D L K R G A F S P Q E E E L I I H L H T I L G N R W S Q I A A R L P G R T D N E I K N F W
 
AT5G12870.1     N S T I K K R L K K M S D T S N L I N N S S S S P N T A S D S S S N S A S S L D I K D I I G S F M S L - Q E Q G F V N P
pt022066_POPTR_    N S T I K K R L K N L - - - - - - - Q S S N A S P N T S D S S S E P S - - - - - - K D V M G G L M S T M Q E Q G I F S M
gm034611_Glyma1    N S T L K K R L K T N - - - - - - - T S T P S L N N S T G - S S E S N - - - - - - K D V L S G I M P F - N E H D I M T M
pt021169_POPTR_    N S T L K K R L K I N - - - - - - - N T S T S S P N D S D - S S E P R - - - - - - D H A I G N I M P T - H D P D T M T L
 
AT5G12870.1     S L T - - - H I Q T N N P F P T G N M I S H P C N D D F T P Y V D - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt022066_POPTR_    N M D P S M S S S S S L A T S M K A M I L N T M M D P L L P M L D Y D H G L N M Y G G A S G Y E S I T A P P C M A Q V G
gm034611_Glyma1    C M D - - - - S S S S I S - S M Q A M V L P D Q F D P F F - M L A - N N Q C D M T N V S S D F S N M - P A A C L T Q I G
pt021169_POPTR_    C M D - - - - S S S S S S I S M Q G M I T S N R F D S F S - M L - - N N R Y D V T G A A S L F D M - - - S T C L T Q V G
 
AT5G12870.1     - - - - - - - G I Y G V N A G V - - - - - - - - - Q G E L Y F P P L E C - - - E E G D W - - - - - - - - - - Y N A N I N
pt022066_POPTR_    V L N S G D H G F Y G E - - G I F E G - - - - - - - I N V E I P P L E S - N I Q D N N T - - - - - - D K Y S Y S S P V N
gm034611_Glyma1    M V D - - - - G H Q G N - Y G I L E P - N K M G S G I D F S L P S L E S R S I E S N S V - - - - P I D V K S - - - - H N
pt021169_POPTR_    M G D - - - - G F Y G D H Y G I L E A N N K T G L E S D L S L P P L E S R S F E E N N T V S N N R I G M K S S S N N N N
 
AT5G12870.1     N H L D E L N T N G S - - - - - - - - - - - - - - - - - - G N A P E G - - - M R P V E E F W D L D Q L M N T E V P S F -
pt022066_POPTR_    S L Y H K N C N I T S - - - N N K T D S I A A D Q M - - - G N L W H G S E E L K V G E - - W D L E E L M K - D V S A F P
gm034611_Glyma1    N H F N Y G S F K N T - - - - D K I Q G S K V E D L I G F G N H G Q G - E N L K M G E - - W D L E N L M Q - D I T S F P
pt021169_POPTR_    N C F D N T C F D N T C F N N N T D Q R F K V E D M L G L E N H W Q G - E N L R M G E - - W D F E G L M E - N I T S F P
 
AT5G12870.1     Y F N F K Q S I
pt022066_POPTR_    F L D F Q - - -
gm034611_Glyma1    F L D F - - - -
pt021169_POPTR_    L L D F H V E -
 
0