fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G12870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041053 not found in 334aa AT5G12870.1 1st_1st 0.457627118 Ia
Pt032427 not found in 281aa AT5G12870.1 1st_1st 0.440677966 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G12870.1     MRKPEVAI---AASTHQVKKMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGK
pt032427_POPTR_ MRKPEASG----KNNDISNKFKKGLWSPEEDDKLMNYILNNGQGCWSDVARNAGLQRCGK
gm041053_Glyma1 MRKPEASNNNTKNNNNNSKKLRKGLWSPEEDDKLMNYMLNHGQGCWSDVARNAGLQRCGK
                *****.:      ...  :*::*********.***:*:*.:*********:*********

AT5G12870.1     SCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNST
pt032427_POPTR_ SCRLRWINYLRPDLKRGAFSPQEEEMTIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNST
gm041053_Glyma1 SCRLRWINYLRPDLKRGAFSPQEEELIIHFHSLLGNRWSQIAARLPGRTDNEIKNFWNST
                ************************:: *::**:***************************

AT5G12870.1     IKKRLKKMSDTSNLINNSSSSPNTASDSSSNSASSLDIKD-IIGSFMSLQEQ---GFV--
pt032427_POPTR_ IKKRLKSLQSS-----NASPNTSDSS-------SEPSKE--VMGGFITMQEQ---GILPM
gm041053_Glyma1 IKKRLRNMSST-----TTTTSPSPSSNASETSISEPSNKDLNMGGFISTQHNQHAGFVPM
                *****:.:..:     .::.... :*       *. . :   :*.*:: *.:   *::  

AT5G12870.1     --------NPSLTHIQTNNPFPT-----GNMI--SH----------------PC------
pt032427_POPTR_ NMDPSLSSSSSLETSMQAMILNTMMDPLLPMLDHDHGLNMYIGG----------------
gm041053_Glyma1 -----FGSSPSPSIMQTGTVFNTLIDR-LPML--EHGLNMPASGGYFEGTGIPCFSQSEV
                        ..*         : *       *:  .*                        

AT5G12870.1     NDDFTPYVD-GIYG--VNAGVQGELYFPPLE---CEEGDWYNANINNHLDELN----TNG
pt032427_POPTR_ ----------------VNVG------IPPLESVSCMEENAKSQTIQD--NSTDKHPYSSY
gm041053_Glyma1 NKLGSCYLENGVFGRSVNIGVEGDMFVPPLENATCSRRETTNSSYFD--DDIN-----SI
                                ** *      .****   * . :  . .  :  :. :     . 

AT5G12870.1     SGNAPEGMR--------------------PVEEFWDLDQLMNTEVPSF-YFNFKQSI
pt032427_POPTR_ TDNAAAEMG---------NFWHGE---ELKVGEYWDLEDFMR-DVSACPSLDFQS--
gm041053_Glyma1 LNNCNIGIGENKAHDGVENLFQQELATATATGE-WDFEELMKLDVSSFPFLDFSY--
                 .*.   :                      . * **::::*. :*.:   ::*.
BoxShade v3.31 C (beta, 970507) Output
AT5G12870.1     M R K P E V A I - - - A A S T H Q V K K M K K G L W S P E E D S K L M Q Y M L S N G Q G C W S D V A K N A G L Q R C G K
pt032427_POPTR_    M R K P E A S G - - - - K N N D I S N K F K K G L W S P E E D D K L M N Y I L N N G Q G C W S D V A R N A G L Q R C G K
gm041053_Glyma1    M R K P E A S N N N T K N N N N N S K K L R K G L W S P E E D D K L M N Y M L N H G Q G C W S D V A R N A G L Q R C G K
 
AT5G12870.1     S C R L R W I N Y L R P D L K R G A F S P Q E E D L I I R F H S I L G N R W S Q I A A R L P G R T D N E I K N F W N S T
pt032427_POPTR_    S C R L R W I N Y L R P D L K R G A F S P Q E E E M T I H L H S L L G N R W S Q I A A R L P G R T D N E I K N F W N S T
gm041053_Glyma1    S C R L R W I N Y L R P D L K R G A F S P Q E E E L I I H F H S L L G N R W S Q I A A R L P G R T D N E I K N F W N S T
 
AT5G12870.1     I K K R L K K M S D T S N L I N N S S S S P N T A S D S S S N S A S S L D I K D - I I G S F M S L Q E Q - - - G F V - -
pt032427_POPTR_    I K K R L K S L Q S S - - - - - N A S P N T S D S S - - - - - - - S E P S K E - - V M G G F I T M Q E Q - - - G I L P M
gm041053_Glyma1    I K K R L R N M S S T - - - - - T T T T S P S P S S N A S E T S I S E P S N K D L N M G G F I S T Q H N Q H A G F V P M
 
AT5G12870.1     - - - - - - - - N P S L T H I Q T N N P F P T - - - - - G N M I - - S H - - - - - - - - - - - - - - - - P C - - - - - -
pt032427_POPTR_    N M D P S L S S S S S L E T S M Q A M I L N T M M D P L L P M L D H D H G L N M Y I G G - - - - - - - - - - - - - - - -
gm041053_Glyma1    - - - - - F G S S P S P S I M Q T G T V F N T L I D R - L P M L - - E H G L N M P A S G G Y F E G T G I P C F S Q S E V
 
AT5G12870.1     N D D F T P Y V D - G I Y G - - V N A G V Q G E L Y F P P L E - - - C E E G D W Y N A N I N N H L D E L N - - - - T N G
pt032427_POPTR_    - - - - - - - - - - - - - - - - V N V G - - - - - - I P P L E S V S C M E E N A K S Q T I Q D - - N S T D K H P Y S S Y
gm041053_Glyma1    N K L G S C Y L E N G V F G R S V N I G V E G D M F V P P L E N A T C S R R E T T N S S Y F D - - D D I N - - - - - S I
 
AT5G12870.1     S G N A P E G M R - - - - - - - - - - - - - - - - - - - - P V E E F W D L D Q L M N T E V P S F - Y F N F K Q S I
pt032427_POPTR_    T D N A A A E M G - - - - - - - - - N F W H G E - - - E L K V G E Y W D L E D F M R - D V S A C P S L D F Q S - -
gm041053_Glyma1    L N N C N I G I G E N K A H D G V E N L F Q Q E L A T A T A T G E - W D F E E L M K L D V S S F P F L D F S Y - -
 
0