fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G12870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt022066 not found in 321aa AT3G08500.1 not_not 0.433145009 III
Pt021169 not found in 333aa AT3G08500.1 not_not 0.401129943 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G12870.1     MRKPEVAIAAST---HQVK--KMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRC
pt022066_POPTR_ MRKPEASGKNNV---NNIN--KFRKGLWSPEEDDKLMNYMLNNGQGCWSDVARNAGLQRC
pt021169_POPTR_ MRKPDLVGKDRVPSNSSINKAKLRKGLWSPEEDEKLIKYMLTNGQGCWSDIARNAGLQRC
                ****:      .    .::  *::*********.**::***.********:*:*******

AT5G12870.1     GKSCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWN
pt022066_POPTR_ GKSCRLRWINYLRPDLKRGAFSPQEEEMIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWN
pt021169_POPTR_ GKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHTILGNRWSQIAARLPGRTDNEIKNFWN
                **************************::**::*::*************************

AT5G12870.1     STIKKRLKKMSDTSNLINNSSSSPNTASDSSSNSASSLDIKDIIGSFMS-LQEQGF----
pt022066_POPTR_ STIKKRLKNL-------QSSNASPNT-SDSSSEPS-----KDVMGGLMSTMQEQGIFSMN
pt021169_POPTR_ STLKKRLKIN-------NTSTSSPND-SD-SSEPR-----DHAIGNIMPTHDPD-----T
                **:*****         :.*.:***  ** **:.      .. :*.:*.  : :      

AT5G12870.1     ----------VNPSLTHIQTNNPFPT-GNMISH---------------------PC----
pt022066_POPTR_ MDPSMSSSSSLATSMKAMILNTMMDPLLPMLD--YDHGLNMYGGASGYESITAPPCMAQV
pt021169_POPTR_ MTLCMDSSSSSSISMQGMITSNRFDS-FSMLNNRYD----VTGAASLFDMST---CLTQV
                             *:  :  .. : .   *:.                       *    

AT5G12870.1     ----NDDFTPYVD--GIY-GVN-AGVQGELYFPPLEC---EEGDWY--------------
pt022066_POPTR_ GVLNSGDHGFYGE--GIFEGIN-------VEIPPLES-NIQDNNT------DKYSYSSPV
pt021169_POPTR_ GM---GD-GFYGDHYGILEANNKTGLESDLSLPPLESRSFEENNTVSNNRIGMKSSSNNN
                     .*   * :  **  . *       : :****.   ::.:                

AT5G12870.1     ----------NANINNHLDE--LNTNGSG--NAPEG---MRPVEEFWDLDQLMNTEVPSF
pt022066_POPTR_ NSLYHKNC--NITSNNKTDS--IAADQMG--NLWHGSEELKVGE--WDLEELMK-DVSAF
pt021169_POPTR_ NNCFDNTCFDNTCFNNNTDQRFKVEDMLGLENHWQG-ENLRMGE--WDFEGLME-NITSF
                          *   **: *.     :  *  *  .*   ::  *  **:: **: ::.:*

AT5G12870.1     -YFNFKQSI
pt022066_POPTR_ PFLDFQ---
pt021169_POPTR_ PLLDFHVE-
                  ::*:
BoxShade v3.31 C (beta, 970507) Output
AT5G12870.1     M R K P E V A I A A S T - - - H Q V K - - K M K K G L W S P E E D S K L M Q Y M L S N G Q G C W S D V A K N A G L Q R C
pt022066_POPTR_    M R K P E A S G K N N V - - - N N I N - - K F R K G L W S P E E D D K L M N Y M L N N G Q G C W S D V A R N A G L Q R C
pt021169_POPTR_    M R K P D L V G K D R V P S N S S I N K A K L R K G L W S P E E D E K L I K Y M L T N G Q G C W S D I A R N A G L Q R C
 
AT5G12870.1     G K S C R L R W I N Y L R P D L K R G A F S P Q E E D L I I R F H S I L G N R W S Q I A A R L P G R T D N E I K N F W N
pt022066_POPTR_    G K S C R L R W I N Y L R P D L K R G A F S P Q E E E M I I H L H S L L G N R W S Q I A A R L P G R T D N E I K N F W N
pt021169_POPTR_    G K S C R L R W I N Y L R P D L K R G A F S P Q E E E L I I H L H T I L G N R W S Q I A A R L P G R T D N E I K N F W N
 
AT5G12870.1     S T I K K R L K K M S D T S N L I N N S S S S P N T A S D S S S N S A S S L D I K D I I G S F M S - L Q E Q G F - - - -
pt022066_POPTR_    S T I K K R L K N L - - - - - - - Q S S N A S P N T - S D S S S E P S - - - - - K D V M G G L M S T M Q E Q G I F S M N
pt021169_POPTR_    S T L K K R L K I N - - - - - - - N T S T S S P N D - S D - S S E P R - - - - - D H A I G N I M P T H D P D - - - - - T
 
AT5G12870.1     - - - - - - - - - - V N P S L T H I Q T N N P F P T - G N M I S H - - - - - - - - - - - - - - - - - - - - - P C - - - -
pt022066_POPTR_    M D P S M S S S S S L A T S M K A M I L N T M M D P L L P M L D - - Y D H G L N M Y G G A S G Y E S I T A P P C M A Q V
pt021169_POPTR_    M T L C M D S S S S S S I S M Q G M I T S N R F D S - F S M L N N R Y D - - - - V T G A A S L F D M S T - - - C L T Q V
 
AT5G12870.1     - - - - N D D F T P Y V D - - G I Y - G V N - A G V Q G E L Y F P P L E C - - - E E G D W Y - - - - - - - - - - - - - -
pt022066_POPTR_    G V L N S G D H G F Y G E - - G I F E G I N - - - - - - - V E I P P L E S - N I Q D N N T - - - - - - D K Y S Y S S P V
pt021169_POPTR_    G M - - - G D - G F Y G D H Y G I L E A N N K T G L E S D L S L P P L E S R S F E E N N T V S N N R I G M K S S S N N N
 
AT5G12870.1     - - - - - - - - - - N A N I N N H L D E - - L N T N G S G - - N A P E G - - - M R P V E E F W D L D Q L M N T E V P S F
pt022066_POPTR_    N S L Y H K N C - - N I T S N N K T D S - - I A A D Q M G - - N L W H G S E E L K V G E - - W D L E E L M K - D V S A F
pt021169_POPTR_    N N C F D N T C F D N T C F N N N T D Q R F K V E D M L G L E N H W Q G - E N L R M G E - - W D F E G L M E - N I T S F
 
AT5G12870.1     - Y F N F K Q S I
pt022066_POPTR_    P F L D F Q - - -
pt021169_POPTR_    P L L D F H V E -
 
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