fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G12870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032427 not found in 281aa AT5G12870.1 1st_1st 0.440677966 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G12870.1     MRKPEVAIAASTHQVKKMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKSCR
pt032427_POPTR_ MRKPE-ASGKNNDISNKFKKGLWSPEEDDKLMNYILNNGQGCWSDVARNAGLQRCGKSCR
                ***** * . ...  :*:**********.***:*:*.**********:************

AT5G12870.1     LRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTIKK
pt032427_POPTR_ LRWINYLRPDLKRGAFSPQEEEMTIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKK
                *********************:: *::**:******************************

AT5G12870.1     RLKKMSDTSNLINNSSSSPNTASDSSSNSASSLDIKDIIGSFMSLQEQGFV----NPSLT
pt032427_POPTR_ RLKSL-------QSSNASPNT-SDSSSEPS-----KEVMGGFITMQEQGILPMNMDPSLS
                ***.:       :.*.:**** *****:.:     *:::*.*:::****::    :***:

AT5G12870.1     HIQTNNPFPTG--NMISHPCNDDFTPYVDGIYGVNAGVQG-ELYFPPLE---CEEGDWYN
pt032427_POPTR_ ---SSSSLETSMQAMILNTMMDPLLPMLDHDHGLNMYIGGVNVGIPPLESVSCMEENAKS
                   :...: *.   ** :.  * : * :*  :*:*  : * :: :****   * * :  .

AT5G12870.1     ANINNHLDELNTNGS---------GNAPEGMR-PVEEFWDLDQLMN--TEVPSFYFNFKQ
pt032427_POPTR_ QTIQDNSTDKHPYSSYTDNAAAEMGNFWHGEELKVGEYWDLEDFMRDVSACPSLDF---Q
                 .*:::  : :. .*         **  .* .  * *:***:::*.  :  **: *   *

AT5G12870.1     SI
pt032427_POPTR_ S-
                *
BoxShade v3.31 C (beta, 970507) Output
AT5G12870.1     M R K P E V A I A A S T H Q V K K M K K G L W S P E E D S K L M Q Y M L S N G Q G C W S D V A K N A G L Q R C G K S C R
pt032427_POPTR_    M R K P E - A S G K N N D I S N K F K K G L W S P E E D D K L M N Y I L N N G Q G C W S D V A R N A G L Q R C G K S C R
 
AT5G12870.1     L R W I N Y L R P D L K R G A F S P Q E E D L I I R F H S I L G N R W S Q I A A R L P G R T D N E I K N F W N S T I K K
pt032427_POPTR_    L R W I N Y L R P D L K R G A F S P Q E E E M T I H L H S L L G N R W S Q I A A R L P G R T D N E I K N F W N S T I K K
 
AT5G12870.1     R L K K M S D T S N L I N N S S S S P N T A S D S S S N S A S S L D I K D I I G S F M S L Q E Q G F V - - - - N P S L T
pt032427_POPTR_    R L K S L - - - - - - - Q S S N A S P N T - S D S S S E P S - - - - - K E V M G G F I T M Q E Q G I L P M N M D P S L S
 
AT5G12870.1     H I Q T N N P F P T G - - N M I S H P C N D D F T P Y V D G I Y G V N A G V Q G - E L Y F P P L E - - - C E E G D W Y N
pt032427_POPTR_    - - - S S S S L E T S M Q A M I L N T M M D P L L P M L D H D H G L N M Y I G G V N V G I P P L E S V S C M E E N A K S
 
AT5G12870.1     A N I N N H L D E L N T N G S - - - - - - - - - G N A P E G M R - P V E E F W D L D Q L M N - - T E V P S F Y F N F K Q
pt032427_POPTR_    Q T I Q D N S T D K H P Y S S Y T D N A A A E M G N F W H G E E L K V G E Y W D L E D F M R D V S A C P S L D F - - - Q
 
AT5G12870.1     S I
pt032427_POPTR_    S -
 
0