fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G12870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb017222 not found in 418aa AT5G12870.1 1st_1st 0.391713747 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G12870.1     MRKPEVAIAASTHQ------VKKMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQR
Sb017222_Sorbi1 MRKPECPAAANSGNAGGAAAATKLRKGLWSPEEDERLVAYMLRSGQGSWSDVARNAGLQR
                ***** . **.: :      ..*::*********.:*: *** .***.*****:******

AT5G12870.1     CGKSCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFW
Sb017222_Sorbi1 CGKSCRLRWINYLRPDLKRGAFSPQEEELIVSLHAILGNRWSQIAARLPGRTDNEIKNFW
                ***************************:**: :*:*************************

AT5G12870.1     NSTIKKRLKKMSDTSNLINNSSSSP---NTASDSSSNSASSLDIKD-------------I
Sb017222_Sorbi1 NSTIKKRLKNTSATSSPAATECASPEPNNKVAAGSCPDLAGLDHQDGGHHHHHHLMTTTT
                *********: * **.   ...:**   *..: .*. . :.** :*              

AT5G12870.1     IGSFMSLQEQGFVNPSLTHIQTNNPFPT---------------GNMISHP-----CNDDF
Sb017222_Sorbi1 TGLWM-VDSSSSCTSSTSPMHQRQPPPTTAIMAAAAVAATRSYGGLVPFPDQLRGVMADA
                 * :* ::...  ..* : :: .:* **               *.::..*        * 

AT5G12870.1     TP--------------------YVDGIYG------------VNAG---VQGELYF----P
Sb017222_Sorbi1 SPPGRFFHGHAAPPFKHQVAALHHGGFYGSTPPHHHGMMATMEGGGCFMRGEDMFVGVVP
                :*                    : .*:**            ::.*   ::**  *    *

AT5G12870.1     PL---------ECEEGDW------------YNANINNHL---------------------
Sb017222_Sorbi1 PLLDPMSAAAQEQEQGQQGLMASSGSNNAKNNNNSNNTTETTTTTTLSNNESNITENNTN
                **         * *:*:              * * **                       

AT5G12870.1     --DELNT-----NGSGNAP---EGMRPVEEF---------WDLDQLMN--TEVPSFYFNF
Sb017222_Sorbi1 TKDNINTISQVNNGSNVAAVFWEGAH--QQYMSRNVMHGEWDLEELMKDVSSLPFLDFQV
                  *::**     ***. *.   ** :  :::         ***::**:  :.:* : *:.

AT5G12870.1     KQSI
Sb017222_Sorbi1 E---
                :
BoxShade v3.31 C (beta, 970507) Output
AT5G12870.1     M R K P E V A I A A S T H Q - - - - - - V K K M K K G L W S P E E D S K L M Q Y M L S N G Q G C W S D V A K N A G L Q R
Sb017222_Sorbi1    M R K P E C P A A A N S G N A G G A A A A T K L R K G L W S P E E D E R L V A Y M L R S G Q G S W S D V A R N A G L Q R
 
AT5G12870.1     C G K S C R L R W I N Y L R P D L K R G A F S P Q E E D L I I R F H S I L G N R W S Q I A A R L P G R T D N E I K N F W
Sb017222_Sorbi1    C G K S C R L R W I N Y L R P D L K R G A F S P Q E E E L I V S L H A I L G N R W S Q I A A R L P G R T D N E I K N F W
 
AT5G12870.1     N S T I K K R L K K M S D T S N L I N N S S S S P - - - N T A S D S S S N S A S S L D I K D - - - - - - - - - - - - - I
Sb017222_Sorbi1    N S T I K K R L K N T S A T S S P A A T E C A S P E P N N K V A A G S C P D L A G L D H Q D G G H H H H H H L M T T T T
 
AT5G12870.1     I G S F M S L Q E Q G F V N P S L T H I Q T N N P F P T - - - - - - - - - - - - - - - G N M I S H P - - - - - C N D D F
Sb017222_Sorbi1    T G L W M - V D S S S S C T S S T S P M H Q R Q P P P T T A I M A A A A V A A T R S Y G G L V P F P D Q L R G V M A D A
 
AT5G12870.1     T P - - - - - - - - - - - - - - - - - - - - Y V D G I Y G - - - - - - - - - - - - V N A G - - - V Q G E L Y F - - - - P
Sb017222_Sorbi1    S P P G R F F H G H A A P P F K H Q V A A L H H G G F Y G S T P P H H H G M M A T M E G G G C F M R G E D M F V G V V P
 
AT5G12870.1     P L - - - - - - - - - E C E E G D W - - - - - - - - - - - - Y N A N I N N H L - - - - - - - - - - - - - - - - - - - - -
Sb017222_Sorbi1    P L L D P M S A A A Q E Q E Q G Q Q G L M A S S G S N N A K N N N N S N N T T E T T T T T T L S N N E S N I T E N N T N
 
AT5G12870.1     - - D E L N T - - - - - N G S G N A P - - - E G M R P V E E F - - - - - - - - - W D L D Q L M N - - T E V P S F Y F N F
Sb017222_Sorbi1    T K D N I N T I S Q V N N G S N V A A V F W E G A H - - Q Q Y M S R N V M H G E W D L E E L M K D V S S L P F L D F Q V
 
AT5G12870.1     K Q S I
Sb017222_Sorbi1    E - - -
 
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