fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G12870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034611 not found in 315aa AT3G08500.1 not_not 0.403013182 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G12870.1     MRKPEV-AIAASTHQVK-KMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKS
gm034611_Glyma1 MRKPDLMANKDKMNNIKSKLRKGLWSPDEDERLVRYMLTNGQGCWSDIARNAGLQRCGKS
                ****:: *   . :::* *::******:**.:*::***:********:*:**********

AT5G12870.1     CRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTI
gm034611_Glyma1 CRLRWINYLRPDLKRGAFSPQEEDLIVHLHSILGNRWSQIAARLPGRTDNEIKNFWNSTL
                **************************:::******************************:

AT5G12870.1     KKRLKKMSDTSNLINNSSSSPNTASDSSSNSASSLDIKDIIGSFMSLQEQGFV------N
gm034611_Glyma1 KKRLKTNTSTPSL-NNSTGS------SESN-------KDVLSGIMPFNEHDIMTMCMDSS
                *****. :.*..* ***:.*      *.**       **::..:*.::*:.::      .

AT5G12870.1     PSLTHIQTN------NPFPTGNMISHPCN-----DDFT--P--------YVD---GIYGV
gm034611_Glyma1 SSISSMQAMVLPDQFDPFFM--LANNQCDMTNVSSDFSNMPAACLTQIGMVDGHQGNYGI
                .*:: :*:       :**    : .: *:     .**:  *         **   * **:

AT5G12870.1     ------NAGVQGELYFPPLECEEGDWYNANI-----NNHLDE---LNTN-----------
gm034611_Glyma1 LEPNKMGSGI--DFSLPSLESRSIESNSVPIDVKSHNNHFNYGSFKNTDKIQGSKVEDLI
                      .:*:  :: :*.**... :  .. *     ***::     **:           

AT5G12870.1     GSGNAPEGMRPVEEFWDLDQLMNTEVPSF-YFNFKQSI
gm034611_Glyma1 GFGNHGQGENLKMGEWDLENLMQ-DITSFPFLDF----
                * **  :* .     ***::**: ::.** :::*
BoxShade v3.31 C (beta, 970507) Output
AT5G12870.1     M R K P E V - A I A A S T H Q V K - K M K K G L W S P E E D S K L M Q Y M L S N G Q G C W S D V A K N A G L Q R C G K S
gm034611_Glyma1    M R K P D L M A N K D K M N N I K S K L R K G L W S P D E D E R L V R Y M L T N G Q G C W S D I A R N A G L Q R C G K S
 
AT5G12870.1     C R L R W I N Y L R P D L K R G A F S P Q E E D L I I R F H S I L G N R W S Q I A A R L P G R T D N E I K N F W N S T I
gm034611_Glyma1    C R L R W I N Y L R P D L K R G A F S P Q E E D L I V H L H S I L G N R W S Q I A A R L P G R T D N E I K N F W N S T L
 
AT5G12870.1     K K R L K K M S D T S N L I N N S S S S P N T A S D S S S N S A S S L D I K D I I G S F M S L Q E Q G F V - - - - - - N
gm034611_Glyma1    K K R L K T N T S T P S L - N N S T G S - - - - - - S E S N - - - - - - - K D V L S G I M P F N E H D I M T M C M D S S
 
AT5G12870.1     P S L T H I Q T N - - - - - - N P F P T G N M I S H P C N - - - - - D D F T - - P - - - - - - - - Y V D - - - G I Y G V
gm034611_Glyma1    S S I S S M Q A M V L P D Q F D P F F M - - L A N N Q C D M T N V S S D F S N M P A A C L T Q I G M V D G H Q G N Y G I
 
AT5G12870.1     - - - - - - N A G V Q G E L Y F P P L E C E E G D W Y N A N I - - - - - N N H L D E - - - L N T N - - - - - - - - - - -
gm034611_Glyma1    L E P N K M G S G I - - D F S L P S L E S R S I E S N S V P I D V K S H N N H F N Y G S F K N T D K I Q G S K V E D L I
 
AT5G12870.1     G S G N A P E G M R P V E E F W D L D Q L M N T E V P S F - Y F N F K Q S I
gm034611_Glyma1    G F G N H G Q G E N L K M G E W D L E N L M Q - D I T S F P F L D F - - - -
 
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