fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G12870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041053 not found in 334aa AT5G12870.1 1st_1st 0.457627118 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G12870.1     MRKPEVA---IAASTHQVKKMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGK
gm041053_Glyma1 MRKPEASNNNTKNNNNNSKKLRKGLWSPEEDDKLMNYMLNHGQGCWSDVARNAGLQRCGK
                *****.:      ..:: **::*********.***:***.:*********:*********

AT5G12870.1     SCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNST
gm041053_Glyma1 SCRLRWINYLRPDLKRGAFSPQEEELIIHFHSLLGNRWSQIAARLPGRTDNEIKNFWNST
                ************************:***:***:***************************

AT5G12870.1     IKKRLKKMSDTSNLINNSSSSPNTASDSSSNSASSLDIKDI-IGSFMSLQEQ---GFV--
gm041053_Glyma1 IKKRLRNMSSTT-----TTTSPSPSSNASETSISEPSNKDLNMGGFISTQHNQHAGFVPM
                *****::**.*:     :::**..:*::*..* *. . **: :*.*:* *.:   ***  

AT5G12870.1     ---NPSLTHIQTNNPFPT----GNMISH----------------PC------NDDFTPYV
gm041053_Glyma1 FGSSPSPSIMQTGTVFNTLIDRLPMLEHGLNMPASGGYFEGTGIPCFSQSEVNKLGSCYL
                   .** : :**.. * *      *:.*                **      *.  : *:

AT5G12870.1     D-GIYG--VNAGVQGELYFPPLE---CEE-----GDWYNANINNHLDELNTN-GSGNAPE
gm041053_Glyma1 ENGVFGRSVNIGVEGDMFVPPLENATCSRRETTNSSYFDDDINSILNNCNIGIGENKAHD
                : *::*  ** **:*:::.****   *..     ..::: :**. *:: * . *..:* :

AT5G12870.1     GMRPV--EEF--------WDLDQLMNTEVPSF-YFNFKQSI
gm041053_Glyma1 GVENLFQQELATATATGEWDFEELMKLDVSSFPFLDFSY--
                *:. :  :*:        **:::**: :*.** :::*.
BoxShade v3.31 C (beta, 970507) Output
AT5G12870.1     M R K P E V A - - - I A A S T H Q V K K M K K G L W S P E E D S K L M Q Y M L S N G Q G C W S D V A K N A G L Q R C G K
gm041053_Glyma1    M R K P E A S N N N T K N N N N N S K K L R K G L W S P E E D D K L M N Y M L N H G Q G C W S D V A R N A G L Q R C G K
 
AT5G12870.1     S C R L R W I N Y L R P D L K R G A F S P Q E E D L I I R F H S I L G N R W S Q I A A R L P G R T D N E I K N F W N S T
gm041053_Glyma1    S C R L R W I N Y L R P D L K R G A F S P Q E E E L I I H F H S L L G N R W S Q I A A R L P G R T D N E I K N F W N S T
 
AT5G12870.1     I K K R L K K M S D T S N L I N N S S S S P N T A S D S S S N S A S S L D I K D I - I G S F M S L Q E Q - - - G F V - -
gm041053_Glyma1    I K K R L R N M S S T T - - - - - T T T S P S P S S N A S E T S I S E P S N K D L N M G G F I S T Q H N Q H A G F V P M
 
AT5G12870.1     - - - N P S L T H I Q T N N P F P T - - - - G N M I S H - - - - - - - - - - - - - - - - P C - - - - - - N D D F T P Y V
gm041053_Glyma1    F G S S P S P S I M Q T G T V F N T L I D R L P M L E H G L N M P A S G G Y F E G T G I P C F S Q S E V N K L G S C Y L
 
AT5G12870.1     D - G I Y G - - V N A G V Q G E L Y F P P L E - - - C E E - - - - - G D W Y N A N I N N H L D E L N T N - G S G N A P E
gm041053_Glyma1    E N G V F G R S V N I G V E G D M F V P P L E N A T C S R R E T T N S S Y F D D D I N S I L N N C N I G I G E N K A H D
 
AT5G12870.1     G M R P V - - E E F - - - - - - - - W D L D Q L M N T E V P S F - Y F N F K Q S I
gm041053_Glyma1    G V E N L F Q Q E L A T A T A T G E W D F E E L M K L D V S S F P F L D F S Y - -
 
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