fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G12870.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041053 not found in 334aa AT5G12870.1 1st_1st 0.457627118 Ia
Gm032872 not found in 276aa AT5G12870.1 not_1st 0.431261770 II
Gm030824 not found in 295aa AT5G12870.1 not_1st 0.421845574 II
Gm034611 not found in 315aa AT3G08500.1 not_not 0.403013182 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G12870.1     MRKPEVAI---AASTHQVKKMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGK
gm041053_Glyma1 MRKPEASNNNTKNNNNNSKKLRKGLWSPEEDDKLMNYMLNHGQGCWSDVARNAGLQRCGK
gm032872_Glyma1 MRKPEVSGNNNNNNNINN-KLRKGLWSPEEDDKLMNYMLNSGQGCWSDVARNAGLQRCGK
gm034611_Glyma1 MRKPDLMANKDKMNNIKS-KLRKGLWSPDEDERLVRYMLTNGQGCWSDIARNAGLQRCGK
gm030824_Glyma1 MRKPEVSG---KNNNINN-KLRKGLWSPEEDDKLMNYMLNSGQGCWSDVARNAGLQRCGK
                ****:        .. :  *::******:**.:*:.***. *******:*:*********

AT5G12870.1     SCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNST
gm041053_Glyma1 SCRLRWINYLRPDLKRGAFSPQEEELIIHFHSLLGNRWSQIAARLPGRTDNEIKNFWNST
gm032872_Glyma1 SCRLRWINYLRPDLKRGAFSQQEEELIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNST
gm034611_Glyma1 SCRLRWINYLRPDLKRGAFSPQEEDLIVHLHSILGNRWSQIAARLPGRTDNEIKNFWNST
gm030824_Glyma1 SCRLRWINYLRPDLKRGAFSPQEEEIIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNST
                ******************** ***::*:::**:***************************

AT5G12870.1     IKKRLKKMSDTSNLINNSSSSPNTASDSSSNSASSLDIKDIIGSFMSL------QEQGFV
gm041053_Glyma1 IKKRLRNMSSTTT-TTSPSPSSN-ASETSISEPSNKDLN--MGGFIST---QHNQHAGFV
gm032872_Glyma1 IKKRLKNMSSNT--------SPN-GSESSY-EPNNRDLN--MAGFTTSNT-QDQQHADFM
gm034611_Glyma1 LKKRLKTNTSTP--------SLNNSTGSSE---SNKDV---LSGIMPF------NEHDIM
gm030824_Glyma1 IKKRLKNLSSNT--------SPN-GSESSY-EPNNKDLN--MAGFTTSNTQQNQQHADFM
                :****:. :...        * * .: :*    .. *:   :..: .       :. .::

AT5G12870.1     --------NPSLT--HIQTNNPFPTGNMISH-----------------PCNDDFT-----
gm041053_Glyma1 PMFGSSP-SPSIMQTGTVFNTLIDRLPMLEHG-LNMPASGGYFEGTGIPCFSQSEVNKLG
gm032872_Glyma1 PMFNSSSQSPSMH--AMVLNSIIDRLPMLEHG-LNMPCS---VDNKG--IYLENG-----
gm034611_Glyma1 TMCMDSSSSISSMQ-AMVLPDQFDPFFMLANNQCDMTNVSSDFSNMPAACLTQIG-----
gm030824_Glyma1 PM-----------------------LPMLEHG-LNMTSSGGFFNSKG-PCFSSSQ-----
                                           *: :                     .       

AT5G12870.1     -PYVD---GIYG----VNAGVQGELYFPPLE--------------------CEEGDWYNA
gm041053_Glyma1 SCYLE--NGVFGR--SVNIGVEGDMFVPPLENATCSRRE------------TTNSSYFDD
gm032872_Glyma1 --------GVFG---SVNIGAEGDVYVPPLESVSTTSDH-NLK-----------GWWGGE
gm034611_Glyma1 --MVDGHQGNYGILEPNKMGSGIDFSLPSLESRSIESNSVPI------------------
gm030824_Glyma1 --------RVFG---SVNIGAEGDMYVPPLESVSTTSDHYNLKLESTCNTDTNNSNYFDD
                          :*     : *   :. .*.**                             

AT5G12870.1     NINNHLDELNTNGSGNAPEG---MRPV-EEF--------------------WDLDQLMNT
gm041053_Glyma1 DINSILNNCNIGIGEN--KA---HDGV-ENLF-------QQELATATATGEWDFEELMKL
gm032872_Glyma1 FVSGRVNHWRVG-----------LGGVNERCF-------ILSLS----------------
gm034611_Glyma1 DVKSHNNHFNYGSFKNTDKIQ--GSKV-EDLIGFGNHGQGENLKM----GEWDLENLMQ-
gm030824_Glyma1 INSIILNNCNINNSNNIKRAENRAGGV-ENLF-------QEELTI----GEWDLEELMK-
                  .   :. . .              * *                               

AT5G12870.1     EVPSF-YFNFKQSI
gm041053_Glyma1 DVSSFPFLDFSY--
gm032872_Glyma1 --------------
gm034611_Glyma1 DITSFPFLDF----
gm030824_Glyma1 DVSSF---------
BoxShade v3.31 C (beta, 970507) Output
AT5G12870.1     M R K P E V A I - - - A A S T H Q V K K M K K G L W S P E E D S K L M Q Y M L S N G Q G C W S D V A K N A G L Q R C G K
gm041053_Glyma1    M R K P E A S N N N T K N N N N N S K K L R K G L W S P E E D D K L M N Y M L N H G Q G C W S D V A R N A G L Q R C G K
gm032872_Glyma1    M R K P E V S G N N N N N N N I N N - K L R K G L W S P E E D D K L M N Y M L N S G Q G C W S D V A R N A G L Q R C G K
gm034611_Glyma1    M R K P D L M A N K D K M N N I K S - K L R K G L W S P D E D E R L V R Y M L T N G Q G C W S D I A R N A G L Q R C G K
gm030824_Glyma1    M R K P E V S G - - - K N N N I N N - K L R K G L W S P E E D D K L M N Y M L N S G Q G C W S D V A R N A G L Q R C G K
 
AT5G12870.1     S C R L R W I N Y L R P D L K R G A F S P Q E E D L I I R F H S I L G N R W S Q I A A R L P G R T D N E I K N F W N S T
gm041053_Glyma1    S C R L R W I N Y L R P D L K R G A F S P Q E E E L I I H F H S L L G N R W S Q I A A R L P G R T D N E I K N F W N S T
gm032872_Glyma1    S C R L R W I N Y L R P D L K R G A F S Q Q E E E L I I H L H S L L G N R W S Q I A A R L P G R T D N E I K N F W N S T
gm034611_Glyma1    S C R L R W I N Y L R P D L K R G A F S P Q E E D L I V H L H S I L G N R W S Q I A A R L P G R T D N E I K N F W N S T
gm030824_Glyma1    S C R L R W I N Y L R P D L K R G A F S P Q E E E I I I H L H S L L G N R W S Q I A A R L P G R T D N E I K N F W N S T
 
AT5G12870.1     I K K R L K K M S D T S N L I N N S S S S P N T A S D S S S N S A S S L D I K D I I G S F M S L - - - - - - Q E Q G F V
gm041053_Glyma1    I K K R L R N M S S T T T - T T S P S P S S N - A S E T S I S E P S N K D L N - - M G G F I S T - - - Q H N Q H A G F V
gm032872_Glyma1    I K K R L K N M S S N T - - - - - - - - S P N - G S E S S Y - E P N N R D L N - - M A G F T T S N T - Q D Q Q H A D F M
gm034611_Glyma1    L K K R L K T N T S T P - - - - - - - - S L N N S T G S S E - - - S N K D V - - - L S G I M P F - - - - - - N E H D I M
gm030824_Glyma1    I K K R L K N L S S N T - - - - - - - - S P N - G S E S S Y - E P N N K D L N - - M A G F T T S N T Q Q N Q Q H A D F M
 
AT5G12870.1     - - - - - - - - N P S L T - - H I Q T N N P F P T G N M I S H - - - - - - - - - - - - - - - - - P C N D D F T - - - - -
gm041053_Glyma1    P M F G S S P - S P S I M Q T G T V F N T L I D R L P M L E H G - L N M P A S G G Y F E G T G I P C F S Q S E V N K L G
gm032872_Glyma1    P M F N S S S Q S P S M H - - A M V L N S I I D R L P M L E H G - L N M P C S - - - V D N K G - - I Y L E N G - - - - -
gm034611_Glyma1    T M C M D S S S S I S S M Q - A M V L P D Q F D P F F M L A N N Q C D M T N V S S D F S N M P A A C L T Q I G - - - - -
gm030824_Glyma1    P M - - - - - - - - - - - - - - - - - - - - - - - L P M L E H G - L N M T S S G G F F N S K G - P C F S S S Q - - - - -
 
AT5G12870.1     - P Y V D - - - G I Y G - - - - V N A G V Q G E L Y F P P L E - - - - - - - - - - - - - - - - - - - - C E E G D W Y N A
gm041053_Glyma1    S C Y L E - - N G V F G R - - S V N I G V E G D M F V P P L E N A T C S R R E - - - - - - - - - - - - T T N S S Y F D D
gm032872_Glyma1    - - - - - - - - G V F G - - - S V N I G A E G D V Y V P P L E S V S T T S D H - N L K - - - - - - - - - - - G W W G G E
gm034611_Glyma1    - - M V D G H Q G N Y G I L E P N K M G S G I D F S L P S L E S R S I E S N S V P I - - - - - - - - - - - - - - - - - -
gm030824_Glyma1    - - - - - - - - R V F G - - - S V N I G A E G D M Y V P P L E S V S T T S D H Y N L K L E S T C N T D T N N S N Y F D D
 
AT5G12870.1     N I N N H L D E L N T N G S G N A P E G - - - M R P V - E E F - - - - - - - - - - - - - - - - - - - - W D L D Q L M N T
gm041053_Glyma1    D I N S I L N N C N I G I G E N - - K A - - - H D G V - E N L F - - - - - - - Q Q E L A T A T A T G E W D F E E L M K L
gm032872_Glyma1    F V S G R V N H W R V G - - - - - - - - - - - L G G V N E R C F - - - - - - - I L S L S - - - - - - - - - - - - - - - -
gm034611_Glyma1    D V K S H N N H F N Y G S F K N T D K I Q - - G S K V - E D L I G F G N H G Q G E N L K M - - - - G E W D L E N L M Q -
gm030824_Glyma1    I N S I I L N N C N I N N S N N I K R A E N R A G G V - E N L F - - - - - - - Q E E L T I - - - - G E W D L E E L M K -
 
AT5G12870.1     E V P S F - Y F N F K Q S I
gm041053_Glyma1    D V S S F P F L D F S Y - -
gm032872_Glyma1    - - - - - - - - - - - - - -
gm034611_Glyma1    D I T S F P F L D F - - - -
gm030824_Glyma1    D V S S F - - - - - - - - -
 
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