fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os038685 not found in 242aa AT5G13080.1 1st_1st 0.642585551 Ia
Sb028672 not found in 317aa AT5G13080.1 1st_1st 0.650190114 Ia
Gm051620 not found in 188aa AT5G13080.1 1st_1st 0.669201520 Ia
Pt004653 not found in 186aa AT5G13080.1 1st_1st 0.665399239 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G13080.1     MEGY--------------DNGSLYA-----------------------------------
gm051620_Glyma1 MENYSML--------FSVSNSSSYPIG------------------VGSSQIGYSG-----
Sb028672_Sorbi1 MENYHMLFGAASTHASSAATPSSYNFMATAAGTSGGGGGGFHDHDRGQRSSGHGGGG---
pt004653_POPTR_ MEKFQILF------PFASTRSSDHPVSSSMTDNSH----ILSDFKADSTSSGFSGS----
Os038685_Os11t0 MENFPILF---ATQPTSSSTSSSYHFMSSSSGSHD------HRHHHGLQAGGNGGGGGGS
                ** :                 * :                                    

AT5G13080.1     -------------PFLSLKSHSK-----PELHQGEEESSKVRSE------------GCSK
gm051620_Glyma1 ---------QSSNAFLGLRPSNELASDDHEKRQGGGDGNMLMSQISGGSINVSDELGGSG
Sb028672_Sorbi1 ---------SSSSFFAELSSNNDDSKEY---------GGASSPPGPAAGSGRGESSVGPA
pt004653_POPTR_ ---------KKENYHLVPRTSSEINKD-------------LNSQ--GASFGI----GSPT
Os038685_Os11t0 LSHGLFMGSSSSSIRMEELSNSKQAGDVVV------DGGATRSPHGGDGDGAAGDDGGDA
                                   . ..                   .                 

AT5G13080.1     SVESS-----KKKGKKQ----RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRC
gm051620_Glyma1 NSNNN-----KKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRC
Sb028672_Sorbi1 AAAGEVDRPPKRKGEKKERRPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNNFPRSYYRC
pt004653_POPTR_ ELKAA-----KKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRC
Os038685_Os11t0 QAAAAGGR---KKGEKKERRPRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRC
                           :**:*:    *:****************************:********

AT5G13080.1     TYGGCNVKKQVQRLTVDQEVVVTTYEGVHSHPIEKSTENFEHILTQMQIYSSF-------
gm051620_Glyma1 THQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF-------
Sb028672_Sorbi1 THQGCNVKKQVQRLSRDEGVVVTTYEGTHTHPIEKSNDNFEHILTQMQIYSGMGSTFSSS
pt004653_POPTR_ TYQGCTVKKQVQRLTKDEGVVVTTYEGMHSHPIEKSNDNFEHILSQMQIYTPF-------
Os038685_Os11t0 THQGCNVKKQVQRLSRDETVVVTTYEGTHTHPIEKSNDNFEHILTQMHIYSGL--TPSSA
                *: **.********: *: ******** *:*****:.:******:**:**: :       

AT5G13080.1     ----------------------
gm051620_Glyma1 ----------------------
Sb028672_Sorbi1 SH----------------NMFH
pt004653_POPTR_ ----------------------
Os038685_Os11t0 AHASSSSPLFPSAAAAASHMFQ
BoxShade v3.31 C (beta, 970507) Output
AT5G13080.1     M E G Y - - - - - - - - - - - - - - D N G S L Y A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm051620_Glyma1    M E N Y S M L - - - - - - - - F S V S N S S S Y P I G - - - - - - - - - - - - - - - - - - V G S S Q I G Y S G - - - - -
Sb028672_Sorbi1    M E N Y H M L F G A A S T H A S S A A T P S S Y N F M A T A A G T S G G G G G G F H D H D R G Q R S S G H G G G G - - -
pt004653_POPTR_    M E K F Q I L F - - - - - - P F A S T R S S D H P V S S S M T D N S H - - - - I L S D F K A D S T S S G F S G S - - - -
Os038685_Os11t0    M E N F P I L F - - - A T Q P T S S S T S S S Y H F M S S S S G S H D - - - - - - H R H H H G L Q A G G N G G G G G G S
 
AT5G13080.1     - - - - - - - - - - - - - P F L S L K S H S K - - - - - P E L H Q G E E E S S K V R S E - - - - - - - - - - - - G C S K
gm051620_Glyma1    - - - - - - - - - Q S S N A F L G L R P S N E L A S D D H E K R Q G G G D G N M L M S Q I S G G S I N V S D E L G G S G
Sb028672_Sorbi1    - - - - - - - - - S S S S F F A E L S S N N D D S K E Y - - - - - - - - - G G A S S P P G P A A G S G R G E S S V G P A
pt004653_POPTR_    - - - - - - - - - K K E N Y H L V P R T S S E I N K D - - - - - - - - - - - - - L N S Q - - G A S F G I - - - - G S P T
Os038685_Os11t0    L S H G L F M G S S S S S I R M E E L S N S K Q A G D V V V - - - - - - D G G A T R S P H G G D G D G A A G D D G G D A
 
AT5G13080.1     S V E S S - - - - - K K K G K K Q - - - - R Y A F Q T R S Q V D I L D D G Y R W R K Y G Q K A V K N N K F P R S Y Y R C
gm051620_Glyma1    N S N N N - - - - - K K K G E K K V R K P R Y A F Q T R S Q V D I L D D G Y R W R K Y G Q K A V K N N K F P R S Y Y R C
Sb028672_Sorbi1    A A A G E V D R P P K R K G E K K E R R P R Y A F Q T R S Q V D I L D D G Y R W R K Y G Q K A V K N N N F P R S Y Y R C
pt004653_POPTR_    E L K A A - - - - - K K K G E K K V R K P R Y A F Q T R S Q V D I L D D G Y R W R K Y G Q K A V K N N K F P R S Y Y R C
Os038685_Os11t0    Q A A A A G G R - - - K K G E K K E R R P R F A F Q T R S Q V D I L D D G Y R W R K Y G Q K A V K N N K F P R S Y Y R C
 
AT5G13080.1     T Y G G C N V K K Q V Q R L T V D Q E V V V T T Y E G V H S H P I E K S T E N F E H I L T Q M Q I Y S S F - - - - - - -
gm051620_Glyma1    T H Q G C N V K K Q V Q R L T K D E G V V V T T Y E G V H T H P I E K T T D N F E H I L S Q M Q I Y T P F - - - - - - -
Sb028672_Sorbi1    T H Q G C N V K K Q V Q R L S R D E G V V V T T Y E G T H T H P I E K S N D N F E H I L T Q M Q I Y S G M G S T F S S S
pt004653_POPTR_    T Y Q G C T V K K Q V Q R L T K D E G V V V T T Y E G M H S H P I E K S N D N F E H I L S Q M Q I Y T P F - - - - - - -
Os038685_Os11t0    T H Q G C N V K K Q V Q R L S R D E T V V V T T Y E G T H T H P I E K S N D N F E H I L T Q M H I Y S G L - - T P S S A
 
AT5G13080.1     - - - - - - - - - - - - - - - - - - - - - -
gm051620_Glyma1    - - - - - - - - - - - - - - - - - - - - - -
Sb028672_Sorbi1    S H - - - - - - - - - - - - - - - - N M F H
pt004653_POPTR_    - - - - - - - - - - - - - - - - - - - - - -
Os038685_Os11t0    A H A S S S S P L F P S A A A A A S H M F Q
 
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