fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp024205 not found in 504aa AT1G29860.1 not_not 0.406844106 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G13080.1     ---------MEGYD-NGSL---------------------YA--------PFLSLKSHS-
pp024205_Pp1s40 MALNERKDCVETKDCSGSVDSSNGGGEEAKLSLDESKDQNYAWAQHVFESQYLDLSNFSP
                         :*  * .**:                     **         :*.*...* 

AT5G13080.1     ----KPELHQG-------------------------------------------------
pp024205_Pp1s40 KGLITPRLGEGGEFPDLGTICASPLFSDQLKFLQSWSPRLPPNSELVWSPKVNNVENSES
                    .*.* :*                                                 

AT5G13080.1     ----------------------------EEESSKVR--------SEGCSKS-VES-----
pp024205_Pp1s40 VSTSTQSGESDPGSSNPMVTSDSAASGSREETKKSRKRLNVECTSEGSNISGVEDVPKNK
                                            .**:.* *        ***.. * **.     

AT5G13080.1     ----------SKKKGKKQ----RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYR
pp024205_Pp1s40 RNNSSLIKQIQKNKGPKRLREPRYAIKTRTEVDVMEDGYKWRKYGQKPVKNSPHPRNYYR
                          .*:** *:    ***::**::**:::***:*******.***. .**.***

AT5G13080.1     CTYGGCNVKKQVQRLTVDQEVVVTTYEGVHSHPIEKSTEN--------------------
pp024205_Pp1s40 CTTAHCPVRKRVERSTEDPGLVITSYEGTHSHPKINQTKNSSGDLNTYEAESLQESISQL
                ** . * *:*:*:* * *  :*:*:***.****  :.*:*                    

AT5G13080.1     ------------------------------------------------------------
pp024205_Pp1s40 QKGLPAMTSALPNLVSPQDNLGLLPNLDSLLTGWPSLMNRNQQPPSLQDNMSFVMAYQIV
                                                                            

AT5G13080.1     ---FE----------------------------------------HILTQMQIYSSF---
pp024205_Pp1s40 RLQFELQARAQQLMRYTAAQQSLAGGLPKNPFNIDPQGFTQFPLPDLLSLMQNYTDLSGD
                   **                                        .:*: ** *:.:   

AT5G13080.1     ------------------------------------------------------------
pp024205_Pp1s40 SNQLEPNHVPKPEPIMQSSLLARRANAARLRTSSLNPNMESSLKRQQFMTQQGMAALHNA
                                                                            

AT5G13080.1     ------------------------
pp024205_Pp1s40 GPPSEQNTSGPDQAPGPAPSSRQL
BoxShade v3.31 C (beta, 970507) Output
AT5G13080.1     - - - - - - - - - M E G Y D - N G S L - - - - - - - - - - - - - - - - - - - - - Y A - - - - - - - - P F L S L K S H S -
pp024205_Pp1s40    M A L N E R K D C V E T K D C S G S V D S S N G G G E E A K L S L D E S K D Q N Y A W A Q H V F E S Q Y L D L S N F S P
 
AT5G13080.1     - - - - K P E L H Q G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp024205_Pp1s40    K G L I T P R L G E G G E F P D L G T I C A S P L F S D Q L K F L Q S W S P R L P P N S E L V W S P K V N N V E N S E S
 
AT5G13080.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - E E E S S K V R - - - - - - - - S E G C S K S - V E S - - - - -
pp024205_Pp1s40    V S T S T Q S G E S D P G S S N P M V T S D S A A S G S R E E T K K S R K R L N V E C T S E G S N I S G V E D V P K N K
 
AT5G13080.1     - - - - - - - - - - S K K K G K K Q - - - - R Y A F Q T R S Q V D I L D D G Y R W R K Y G Q K A V K N N K F P R S Y Y R
pp024205_Pp1s40    R N N S S L I K Q I Q K N K G P K R L R E P R Y A I K T R T E V D V M E D G Y K W R K Y G Q K P V K N S P H P R N Y Y R
 
AT5G13080.1     C T Y G G C N V K K Q V Q R L T V D Q E V V V T T Y E G V H S H P I E K S T E N - - - - - - - - - - - - - - - - - - - -
pp024205_Pp1s40    C T T A H C P V R K R V E R S T E D P G L V I T S Y E G T H S H P K I N Q T K N S S G D L N T Y E A E S L Q E S I S Q L
 
AT5G13080.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp024205_Pp1s40    Q K G L P A M T S A L P N L V S P Q D N L G L L P N L D S L L T G W P S L M N R N Q Q P P S L Q D N M S F V M A Y Q I V
 
AT5G13080.1     - - - F E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H I L T Q M Q I Y S S F - - -
pp024205_Pp1s40    R L Q F E L Q A R A Q Q L M R Y T A A Q Q S L A G G L P K N P F N I D P Q G F T Q F P L P D L L S L M Q N Y T D L S G D
 
AT5G13080.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp024205_Pp1s40    S N Q L E P N H V P K P E P I M Q S S L L A R R A N A A R L R T S S L N P N M E S S L K R Q Q F M T Q Q G M A A L H N A
 
AT5G13080.1     - - - - - - - - - - - - - - - - - - - - - - - -
pp024205_Pp1s40    G P P S E Q N T S G P D Q A P G P A P S S R Q L
 
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