fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt004653 not found in 186aa AT5G13080.1 1st_1st 0.665399239 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G13080.1     MEGYDNGSLYAPFLSLKSHSKP------------------------------ELHQGEEE
pt004653_POPTR_ MEKF---QILFPFASTRSSDHPVSSSMTDNSHILSDFKADSTSSGFSGSKKENYHLVPRT
                ** :   .:  ** * :* .:*                              : *   . 

AT5G13080.1     SSKV----RSEGCS------KSVESSKKKGKKQ----RYAFQTRSQVDILDDGYRWRKYG
pt004653_POPTR_ SSEINKDLNSQGASFGIGSPTELKAAKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYG
                **::    .*:*.*      ..::::****:*:    ***********************

AT5G13080.1     QKAVKNNKFPRSYYRCTYGGCNVKKQVQRLTVDQEVVVTTYEGVHSHPIEKSTENFEHIL
pt004653_POPTR_ QKAVKNNKFPRSYYRCTYQGCTVKKQVQRLTKDEGVVVTTYEGMHSHPIEKSNDNFEHIL
                ****************** **.********* *: ********:********.:******

AT5G13080.1     TQMQIYSSF
pt004653_POPTR_ SQMQIYTPF
                :*****:.*
BoxShade v3.31 C (beta, 970507) Output
AT5G13080.1     M E G Y D N G S L Y A P F L S L K S H S K P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E L H Q G E E E
pt004653_POPTR_    M E K F - - - Q I L F P F A S T R S S D H P V S S S M T D N S H I L S D F K A D S T S S G F S G S K K E N Y H L V P R T
 
AT5G13080.1     S S K V - - - - R S E G C S - - - - - - K S V E S S K K K G K K Q - - - - R Y A F Q T R S Q V D I L D D G Y R W R K Y G
pt004653_POPTR_    S S E I N K D L N S Q G A S F G I G S P T E L K A A K K K G E K K V R K P R Y A F Q T R S Q V D I L D D G Y R W R K Y G
 
AT5G13080.1     Q K A V K N N K F P R S Y Y R C T Y G G C N V K K Q V Q R L T V D Q E V V V T T Y E G V H S H P I E K S T E N F E H I L
pt004653_POPTR_    Q K A V K N N K F P R S Y Y R C T Y Q G C T V K K Q V Q R L T K D E G V V V T T Y E G M H S H P I E K S N D N F E H I L
 
AT5G13080.1     T Q M Q I Y S S F
pt004653_POPTR_    S Q M Q I Y T P F
 
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