fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028672 not found in 317aa AT5G13080.1 1st_1st 0.650190114 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G13080.1     MEGY----------------------------------------DNG-------------
Sb028672_Sorbi1 MENYHMLFGAASTHASSAATPSSYNFMATAAGTSGGGGGGFHDHDRGQRSSGHGGGGSSS
                **.*                                        *.*             

AT5G13080.1     SLYAPFLSLKSHSK----------PELHQGEEESSKVRSEGCSKSVESSKKKGKKQ----
Sb028672_Sorbi1 SFFAELSSNNDDSKEYGGASSPPGPAAGSGRGESSVGPAAAAGEVDRPPKRKGEKKERRP
                *::* : * :..**          *   .*. ***   : ...:  ...*:**:*:    

AT5G13080.1     RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTYGGCNVKKQVQRLTVDQEVV
Sb028672_Sorbi1 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNNFPRSYYRCTHQGCNVKKQVQRLSRDEGVV
                ******************************:*********: ***********: *: **

AT5G13080.1     VTTYEGVHSHPIEKSTENFEHILTQMQIYSSF-------------
Sb028672_Sorbi1 VTTYEGTHTHPIEKSNDNFEHILTQMQIYSGMGSTFSSSSHNMFH
                ******.*:******.:*************.:
BoxShade v3.31 C (beta, 970507) Output
AT5G13080.1     M E G Y - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D N G - - - - - - - - - - - - -
Sb028672_Sorbi1    M E N Y H M L F G A A S T H A S S A A T P S S Y N F M A T A A G T S G G G G G G F H D H D R G Q R S S G H G G G G S S S
 
AT5G13080.1     S L Y A P F L S L K S H S K - - - - - - - - - - P E L H Q G E E E S S K V R S E G C S K S V E S S K K K G K K Q - - - -
Sb028672_Sorbi1    S F F A E L S S N N D D S K E Y G G A S S P P G P A A G S G R G E S S V G P A A A A G E V D R P P K R K G E K K E R R P
 
AT5G13080.1     R Y A F Q T R S Q V D I L D D G Y R W R K Y G Q K A V K N N K F P R S Y Y R C T Y G G C N V K K Q V Q R L T V D Q E V V
Sb028672_Sorbi1    R Y A F Q T R S Q V D I L D D G Y R W R K Y G Q K A V K N N N F P R S Y Y R C T H Q G C N V K K Q V Q R L S R D E G V V
 
AT5G13080.1     V T T Y E G V H S H P I E K S T E N F E H I L T Q M Q I Y S S F - - - - - - - - - - - - -
Sb028672_Sorbi1    V T T Y E G T H T H P I E K S N D N F E H I L T Q M Q I Y S G M G S T F S S S S H N M F H
 
0