fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13080.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043971 not found in 195aa AT5G13080.1 not_1st 0.661596958 II
Gm019830 not found in 147aa AT5G13080.1 not_1st 0.593155893 II
Gm015481 not found in 82aa AT5G13080.1 not_1st 0.441064638 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G13080.1     MEGYD-------------------------NGSLYAPFLSLKSHSK---PELHQGEEE--
gm019830_Glyma0 MEKHQVLSPISS------------------SSSTSPSDFKLGDHNS--------------
gm043971_Glyma1 MENYSMLFPISNSSSYPISTSGVGSSQIGYNGQSSNAFLGLRPSNELLGSDDHDNGGEGG
gm015481_Glyma0 ------------------------------------------------------------
                                                                            

AT5G13080.1     --------------------SSKVRSEGCSKSVE---SSKKKGKKQRYAFQTRSQVDILD
gm019830_Glyma0 --------------------NAHVKKAGLLKTQRPSLKGGKEIKQHRYAFQTRSHVDILD
gm043971_Glyma1 GDGDGNMLMSQISGGSNTNVSDELGGSGNSNNKK---KGEKKVKKPRYAFQTRSQVDILD
gm015481_Glyma0 ------------------------------------------------------------
                                                                            

AT5G13080.1     DGYRWRKYGQKAVKNNKFPRSYYRCTYGGCNVKKQVQRLTVD---------QEVVVTTYE
gm019830_Glyma0 DGYRWRKYGEKSVKNNKFPRNYYRCSYRGCNVKKQIQRHSKD---------EEIVVTTYE
gm043971_Glyma1 DGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKD---------EGVVVTTYE
gm015481_Glyma0 -----------------------MCPFVGCYHNLFISGMALDLFLDIAILMRAPVVTSWK
                                        *.. **  :  :.  : *         .  ***:::

AT5G13080.1     GVHSH----------PIEKSTE-----NFEHILTQMQIYSSF---
gm019830_Glyma0 GIHIH----------PVEKSTE-----SFEQILRNHHIYSLTL--
gm043971_Glyma1 GVHTH----------PIEKTTD-----NFEHILSQMKIYTPF---
gm015481_Glyma0 LIVFHYLFPIFSPLVPIVQNINRTLCLKYISVLLNYKLFVSFVLR
                 :  *          *: :. :     .:  :* : :::
BoxShade v3.31 C (beta, 970507) Output
AT5G13080.1     M E G Y D - - - - - - - - - - - - - - - - - - - - - - - - - N G S L Y A P F L S L K S H S K - - - P E L H Q G E E E - -
gm019830_Glyma0    M E K H Q V L S P I S S - - - - - - - - - - - - - - - - - - S S S T S P S D F K L G D H N S - - - - - - - - - - - - - -
gm043971_Glyma1    M E N Y S M L F P I S N S S S Y P I S T S G V G S S Q I G Y N G Q S S N A F L G L R P S N E L L G S D D H D N G G E G G
gm015481_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G13080.1     - - - - - - - - - - - - - - - - - - - - S S K V R S E G C S K S V E - - - S S K K K G K K Q R Y A F Q T R S Q V D I L D
gm019830_Glyma0    - - - - - - - - - - - - - - - - - - - - N A H V K K A G L L K T Q R P S L K G G K E I K Q H R Y A F Q T R S H V D I L D
gm043971_Glyma1    G D G D G N M L M S Q I S G G S N T N V S D E L G G S G N S N N K K - - - K G E K K V K K P R Y A F Q T R S Q V D I L D
gm015481_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G13080.1     D G Y R W R K Y G Q K A V K N N K F P R S Y Y R C T Y G G C N V K K Q V Q R L T V D - - - - - - - - - Q E V V V T T Y E
gm019830_Glyma0    D G Y R W R K Y G E K S V K N N K F P R N Y Y R C S Y R G C N V K K Q I Q R H S K D - - - - - - - - - E E I V V T T Y E
gm043971_Glyma1    D G Y R W R K Y G Q K A V K N N K F P R S Y Y R C T H Q G C N V K K Q V Q R L T K D - - - - - - - - - E G V V V T T Y E
gm015481_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - M C P F V G C Y H N L F I S G M A L D L F L D I A I L M R A P V V T S W K
 
AT5G13080.1     G V H S H - - - - - - - - - - P I E K S T E - - - - - N F E H I L T Q M Q I Y S S F - - -
gm019830_Glyma0    G I H I H - - - - - - - - - - P V E K S T E - - - - - S F E Q I L R N H H I Y S L T L - -
gm043971_Glyma1    G V H T H - - - - - - - - - - P I E K T T D - - - - - N F E H I L S Q M K I Y T P F - - -
gm015481_Glyma0    L I V F H Y L F P I F S P L V P I V Q N I N R T L C L K Y I S V L L N Y K L F V S F V L R
 
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