fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp001705 not found in 429aa AT4G27410.2 1st_not 0.445273631 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G13180.1     -----------------MDNVKLVKNGV--LRLPPGFRFHPTDEELVVQYLKRKVCSSPL
pp001705_Pp1s16 MREYTEKFAENCDSTSTMVIMKPTRGSIDQLRLPPGFRFHPTDEELVLHYLRRKANSGVF
                                 *  :* .:..:  *****************::**:**. *. :

AT5G13180.1     PASIIPEFDVCRADPWDLPGNL---EKERYFFSTREAKYPNGNRSNRATGSGYWKATGID
pp001705_Pp1s16 QIPVIAEVDLYKFDPWDLPNKALFGEREWYFFSPRDRKYPNGARPNRAAASGYWKATGTD
                  .:*.*.*: : ******.:    *:* ****.*: ***** *.***:.******** *

AT5G13180.1     KRVVTSRGNQIVGLKKTLVFYKGKPPHGSRTDWIMHEYRLSSS-PPSSMGPTQN------
pp001705_Pp1s16 KPIHMSKGHSKVGVKKALVFYRGKAPKGEKTNWIMHEYRLAEGVSTSTHHPRRNSSRLDD
                * :  *:*:. **:**:****:**.*:*.:*:********:.. ..*:  * :*      

AT5G13180.1     WVLCRIFLK----KRAGNKNDD--------------DD----------------------
pp001705_Pp1s16 WVLCRIYEKTSHAQRASKEYENSSVEEVLASLPDSVDDLRFVLPRLNSLNGNLELAVQQE
                ******: *    :**.:: ::              **                      

AT5G13180.1     --GDSR---------NLRHN---------NNNNSS----------DQIEIITTDQTDD--
pp001705_Pp1s16 ALGDNRLTEKASENGCLSANFDSIQKGTMSNNPGSLLTLANDWKLQQSMTINHDTLESSR
                  **.*          *  *         .** .*          :*   *. *  :.  

AT5G13180.1     ----------------KTKPIFFDFMRKER--TTDLNLLPSSPSSDHASSGVTT------
pp001705_Pp1s16 LMGHLASTSSVHRPALSTRPMANSFMAQFRHPPRSYHLCPSSGQEKILPAGHSTFDEEVQ
                                .*:*:  .** : *  . . :* *** ...  .:* :*      

AT5G13180.1     ----------------------EIFSSSDEETSSCNSFR---------------------
pp001705_Pp1s16 STLRSSAMGYTNARSSNDQGLETMFSAVSYEDRSNPSYGGPAVTEHSVYPAIPTPPSMDF
                                       :**: . *  *  *:                      

AT5G13180.1     ---------
pp001705_Pp1s16 NFSYAGDFN
BoxShade v3.31 C (beta, 970507) Output
AT5G13180.1     - - - - - - - - - - - - - - - - - M D N V K L V K N G V - - L R L P P G F R F H P T D E E L V V Q Y L K R K V C S S P L
pp001705_Pp1s16    M R E Y T E K F A E N C D S T S T M V I M K P T R G S I D Q L R L P P G F R F H P T D E E L V L H Y L R R K A N S G V F
 
AT5G13180.1     P A S I I P E F D V C R A D P W D L P G N L - - - E K E R Y F F S T R E A K Y P N G N R S N R A T G S G Y W K A T G I D
pp001705_Pp1s16    Q I P V I A E V D L Y K F D P W D L P N K A L F G E R E W Y F F S P R D R K Y P N G A R P N R A A A S G Y W K A T G T D
 
AT5G13180.1     K R V V T S R G N Q I V G L K K T L V F Y K G K P P H G S R T D W I M H E Y R L S S S - P P S S M G P T Q N - - - - - -
pp001705_Pp1s16    K P I H M S K G H S K V G V K K A L V F Y R G K A P K G E K T N W I M H E Y R L A E G V S T S T H H P R R N S S R L D D
 
AT5G13180.1     W V L C R I F L K - - - - K R A G N K N D D - - - - - - - - - - - - - - D D - - - - - - - - - - - - - - - - - - - - - -
pp001705_Pp1s16    W V L C R I Y E K T S H A Q R A S K E Y E N S S V E E V L A S L P D S V D D L R F V L P R L N S L N G N L E L A V Q Q E
 
AT5G13180.1     - - G D S R - - - - - - - - - N L R H N - - - - - - - - - N N N N S S - - - - - - - - - - D Q I E I I T T D Q T D D - -
pp001705_Pp1s16    A L G D N R L T E K A S E N G C L S A N F D S I Q K G T M S N N P G S L L T L A N D W K L Q Q S M T I N H D T L E S S R
 
AT5G13180.1     - - - - - - - - - - - - - - - - K T K P I F F D F M R K E R - - T T D L N L L P S S P S S D H A S S G V T T - - - - - -
pp001705_Pp1s16    L M G H L A S T S S V H R P A L S T R P M A N S F M A Q F R H P P R S Y H L C P S S G Q E K I L P A G H S T F D E E V Q
 
AT5G13180.1     - - - - - - - - - - - - - - - - - - - - - - E I F S S S D E E T S S C N S F R - - - - - - - - - - - - - - - - - - - - -
pp001705_Pp1s16    S T L R S S A M G Y T N A R S S N D Q G L E T M F S A V S Y E D R S N P S Y G G P A V T E H S V Y P A I P T P P S M D F
 
AT5G13180.1     - - - - - - - - -
pp001705_Pp1s16    N F S Y A G D F N
 
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