fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029735 not found in 257aa AT5G13180.1 1st_1st 0.733830845 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G13180.1     MDNVKLVKNGVLRLPPGFRFHPTDEELVVQYLKRKVCSSPLPASIIPEFDVCRADPWDLP
pt029735_POPTR_ MEKLSFVKNGVLRLPPGFRFHPTDEELVVQYLKRKVFACPLPASIIPEVDVCKSDPWDLP
                *:::.:****************************** :.*********.***::******

AT5G13180.1     GNLEKERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKRVVTSRGNQIVGLKKTLVFYK
pt029735_POPTR_ GDLEQERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKQIVTSKGHQVVGMKKTLVFYR
                *:**:**********************************::***:*:*:**:*******:

AT5G13180.1     GKPPHGSRTDWIMHEYRLSSSPP----------SSMGPT----QNWVLCRIFLKKRAGNK
pt029735_POPTR_ GKPPHGTRTDWIMHEYRLASTETTACNTLKNKNSTQGPVVVPMENWVLCRIFLKKR-GTK
                ******:***********:*: .          *: **.    :************ *.*

AT5G13180.1     NDDDDGDSRNLRHNNNNNSSDQIEIITTDQTDDKTKPIFFDFMRKERTTDLNLLPSSPSS
pt029735_POPTR_ NEEE-----NIQVGNDNRLPKL----------RATEPVFYDFMTKEKTTDLNLAPSSSSS
                *:::     *:: .*:*. ..             *:*:*:*** **:****** ***.**

AT5G13180.1     DHASSGVTTEIF---SSSDEETSSCNSFR------
pt029735_POPTR_ --GSSGITEEVSCNESDDHEESSSCNSFPYVRRKP
                  .***:* *:    *...**:******
BoxShade v3.31 C (beta, 970507) Output
AT5G13180.1     M D N V K L V K N G V L R L P P G F R F H P T D E E L V V Q Y L K R K V C S S P L P A S I I P E F D V C R A D P W D L P
pt029735_POPTR_    M E K L S F V K N G V L R L P P G F R F H P T D E E L V V Q Y L K R K V F A C P L P A S I I P E V D V C K S D P W D L P
 
AT5G13180.1     G N L E K E R Y F F S T R E A K Y P N G N R S N R A T G S G Y W K A T G I D K R V V T S R G N Q I V G L K K T L V F Y K
pt029735_POPTR_    G D L E Q E R Y F F S T R E A K Y P N G N R S N R A T G S G Y W K A T G I D K Q I V T S K G H Q V V G M K K T L V F Y R
 
AT5G13180.1     G K P P H G S R T D W I M H E Y R L S S S P P - - - - - - - - - - S S M G P T - - - - Q N W V L C R I F L K K R A G N K
pt029735_POPTR_    G K P P H G T R T D W I M H E Y R L A S T E T T A C N T L K N K N S T Q G P V V V P M E N W V L C R I F L K K R - G T K
 
AT5G13180.1     N D D D D G D S R N L R H N N N N N S S D Q I E I I T T D Q T D D K T K P I F F D F M R K E R T T D L N L L P S S P S S
pt029735_POPTR_    N E E E - - - - - N I Q V G N D N R L P K L - - - - - - - - - - R A T E P V F Y D F M T K E K T T D L N L A P S S S S S
 
AT5G13180.1     D H A S S G V T T E I F - - - S S S D E E T S S C N S F R - - - - - -
pt029735_POPTR_    - - G S S G I T E E V S C N E S D D H E E S S S C N S F P Y V R R K P
 
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