fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm015460 not found in 248aa AT5G13180.1 not_1st 0.547263681 II
Gm019810 not found in 247aa AT5G13180.1 not_1st 0.532338308 II
Gm013571 not found in 241aa AT5G13180.1 not_1st 0.532338308 II
Gm027381 not found in 111aa AT5G13180.1 not_1st 0.460199004 II
Gm023502 not found in 169aa AT5G13180.1 not_1st 0.435323383 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G13180.1     MDNVKLVKNGVLRLPPGFRFHPTDEELVVQYLKRKVCSSPLPASIIPEFDVCRADPWDLP
gm023502_Glyma0 -------------MPP------------------------------------------FL
gm013571_Glyma0 MEKLNFVKNGVSKLPPGFRFQPTDEELVFQYLKCKVFSYPLPASIIPEINVCKYDPWDLP
gm015460_Glyma0 MERLNFIKNGVSRLPPGFRFQPTDEELVFQYLKCKIFSCQLPASIIPEINVSKNDPWDLP
gm027381_Glyma1 ------------------------MELVLQYLKRKVFSCPLPASIIPELHVCKSDPWDLP
gm019810_Glyma0 MEKLNFVKNGVSKLPPGFRFQPTDEELVFQYLKCKVFSYPLPASIIPEINVCKYDPWDLP
                                                                          : 

AT5G13180.1     GNLE-KERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKRVVTSRG--NQIVGLKKTLV
gm023502_Glyma0 GDLE-QERYFFSTKVAKYPNGNRSNRATNSGYWKATGLDKQIVTSKGN-NQVVGMKKTLV
gm013571_Glyma0 GNCDPQERHFFSPKEAKYRNGNRMNRTTKCGYWKATGSDKRISSSTSTCNGIVGVRKTLI
gm015460_Glyma0 GNCDEQERYFFSSKEAKYRNGNRMNRTTNSGYWKATGSDKKISSSISN-IGFAGLRKTLV
gm027381_Glyma1 GDLE-QERYFFSTKVAKYPNGNRSNRATNSGYWKATGLDKQIVTSKGN-NQVFEMNKTLV
gm019810_Glyma0 GNCDLQERHFFSPKEAKYRNGNRMNRTTKCGYWKATGSDKRISSSTCN-NGIVGVRKTLI
                *: : :**:***.: *** **** **:* .******* **:: :*      .  :.***:

AT5G13180.1     FYKGKPPHGSRTDWIMHEYRLSSSPPSSMGPTQ--------NWVLCRIFLKKRAGNKNDD
gm023502_Glyma0 FYRGKPPNGSRTDWIMHEYRLI----LNASQSQ-SHVVPMENWVLCRIFLKRRIGAKNGE
gm013571_Glyma0 FYEGKSPKGSRTHWVLHEYRLVSVETGAANSSH-NYVNEIGDWVLCRLSMKKRS----VE
gm015460_Glyma0 FYEGKSPNGSRTDWVMHEYRLVSLETIPSNSSQ-NYANEIGDWILCRIFMKKRS----IE
gm027381_Glyma1 FCRGKPPYGSRTDWIMH-------------------------------------------
gm019810_Glyma0 FYEGKSPKGSRTHWVLHEYRLVSVETGAANSSHNNYVNEIGDWVLCRLSMKKRS----LE
                * .**.* ****.*::*                                           

AT5G13180.1     DDGDSRNLRHNNNNNSSDQIEIITTDQTDDKTKPIF-FDFMRKERTT-DLNLLPSSPSSD
gm023502_Glyma0 ESN----------------------------SKVVF-YDFLAQNKTD----------SSS
gm013571_Glyma0 SDGSGTHHKHRQNTAV----------QT---TRPRLMFDFMMVGKTN-------SSTSSS
gm015460_Glyma0 SDNNNT--APRKNNAVTNY------AQV---AQPRF-FDFLSVHNSAPPVPIQYSSTSSS
gm027381_Glyma1 ------------------------------------------------------------
gm019810_Glyma0 SDGSATHQKHRQNNTV----------QT---SRPRLMFDFMMVGKTN-------SSTSSS
                                                                            

AT5G13180.1     HASSGVTTE---IFSSS---DEETSSCNSFR-------
gm023502_Glyma0 SVASGITHE-----SDE---HEESSSSNTFPYTIRRKP
gm013571_Glyma0 CSSSSNIME----VSSNASDHEETS---GYAHF-----
gm015460_Glyma0 CSSSNNVVE-----ASSPNNHEETS--SGYAHF-----
gm027381_Glyma1 --------------------------------------
gm019810_Glyma0 CSSSSNIMERIPRVSSSTFIKENGSYINGYAH------
BoxShade v3.31 C (beta, 970507) Output
AT5G13180.1     M D N V K L V K N G V L R L P P G F R F H P T D E E L V V Q Y L K R K V C S S P L P A S I I P E F D V C R A D P W D L P
gm023502_Glyma0    - - - - - - - - - - - - - M P P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F L
gm013571_Glyma0    M E K L N F V K N G V S K L P P G F R F Q P T D E E L V F Q Y L K C K V F S Y P L P A S I I P E I N V C K Y D P W D L P
gm015460_Glyma0    M E R L N F I K N G V S R L P P G F R F Q P T D E E L V F Q Y L K C K I F S C Q L P A S I I P E I N V S K N D P W D L P
gm027381_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - M E L V L Q Y L K R K V F S C P L P A S I I P E L H V C K S D P W D L P
gm019810_Glyma0    M E K L N F V K N G V S K L P P G F R F Q P T D E E L V F Q Y L K C K V F S Y P L P A S I I P E I N V C K Y D P W D L P
 
AT5G13180.1     G N L E - K E R Y F F S T R E A K Y P N G N R S N R A T G S G Y W K A T G I D K R V V T S R G - - N Q I V G L K K T L V
gm023502_Glyma0    G D L E - Q E R Y F F S T K V A K Y P N G N R S N R A T N S G Y W K A T G L D K Q I V T S K G N - N Q V V G M K K T L V
gm013571_Glyma0    G N C D P Q E R H F F S P K E A K Y R N G N R M N R T T K C G Y W K A T G S D K R I S S S T S T C N G I V G V R K T L I
gm015460_Glyma0    G N C D E Q E R Y F F S S K E A K Y R N G N R M N R T T N S G Y W K A T G S D K K I S S S I S N - I G F A G L R K T L V
gm027381_Glyma1    G D L E - Q E R Y F F S T K V A K Y P N G N R S N R A T N S G Y W K A T G L D K Q I V T S K G N - N Q V F E M N K T L V
gm019810_Glyma0    G N C D L Q E R H F F S P K E A K Y R N G N R M N R T T K C G Y W K A T G S D K R I S S S T C N - N G I V G V R K T L I
 
AT5G13180.1     F Y K G K P P H G S R T D W I M H E Y R L S S S P P S S M G P T Q - - - - - - - - N W V L C R I F L K K R A G N K N D D
gm023502_Glyma0    F Y R G K P P N G S R T D W I M H E Y R L I - - - - L N A S Q S Q - S H V V P M E N W V L C R I F L K R R I G A K N G E
gm013571_Glyma0    F Y E G K S P K G S R T H W V L H E Y R L V S V E T G A A N S S H - N Y V N E I G D W V L C R L S M K K R S - - - - V E
gm015460_Glyma0    F Y E G K S P N G S R T D W V M H E Y R L V S L E T I P S N S S Q - N Y A N E I G D W I L C R I F M K K R S - - - - I E
gm027381_Glyma1    F C R G K P P Y G S R T D W I M H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm019810_Glyma0    F Y E G K S P K G S R T H W V L H E Y R L V S V E T G A A N S S H N N Y V N E I G D W V L C R L S M K K R S - - - - L E
 
AT5G13180.1     D D G D S R N L R H N N N N N S S D Q I E I I T T D Q T D D K T K P I F - F D F M R K E R T T - D L N L L P S S P S S D
gm023502_Glyma0    E S N - - - - - - - - - - - - - - - - - - - - - - - - - - - - S K V V F - Y D F L A Q N K T D - - - - - - - - - - S S S
gm013571_Glyma0    S D G S G T H H K H R Q N T A V - - - - - - - - - - Q T - - - T R P R L M F D F M M V G K T N - - - - - - - S S T S S S
gm015460_Glyma0    S D N N N T - - A P R K N N A V T N Y - - - - - - A Q V - - - A Q P R F - F D F L S V H N S A P P V P I Q Y S S T S S S
gm027381_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm019810_Glyma0    S D G S A T H Q K H R Q N N T V - - - - - - - - - - Q T - - - S R P R L M F D F M M V G K T N - - - - - - - S S T S S S
 
AT5G13180.1     H A S S G V T T E - - - I F S S S - - - D E E T S S C N S F R - - - - - - -
gm023502_Glyma0    S V A S G I T H E - - - - - S D E - - - H E E S S S S N T F P Y T I R R K P
gm013571_Glyma0    C S S S S N I M E - - - - V S S N A S D H E E T S - - - G Y A H F - - - - -
gm015460_Glyma0    C S S S N N V V E - - - - - A S S P N N H E E T S - - S G Y A H F - - - - -
gm027381_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm019810_Glyma0    C S S S S N I M E R I P R V S S S T F I K E N G S Y I N G Y A H - - - - - -
 
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