fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm023501 not found in 224aa AT5G13180.1 1st_1st 0.686567164 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G13180.1     MDNVKLVKNGVLRLPPGFRFHPTDEELVVQYLKRKVCSSPLPASIIPEFDVCRADPWDLP
gm023501_Glyma0 MEKVNFVKNGELRLPPGFRFHPTDEELVLQYLKRKVFSCPLPASIIPELHVCKSDPWDLP
                *::*::**** *****************:******* *.*********:.**::******

AT5G13180.1     GNLEKERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKRVVTSRG-NQIVGLKKTLVFY
gm023501_Glyma0 GDLEQERYFFSTKVAKYPNGNRSNRATNSGYWKATGLDKQIVTSKGNNQVVGMKKTLVFY
                *:**:*******: *************.********:**::***:* **:**:*******

AT5G13180.1     KGKPPHGSRTDWIMHEYRL---SSSPPSSMGPTQNWVLCRIFLKKRAGNKNDDDDGDSRN
gm023501_Glyma0 RGKPPNGSRTDWIMHEYRLILNASQSQSHVVPMENWVLCRIFLKRRIGAKN----GEESN
                :****:*************   :*.. * : * :**********:* * **    *:. *

AT5G13180.1     LRHNNNNNSSDQIEIITTDQTDDKTKPIFFDFMRKERTTDLNLLPSSPSSDHASSGVTTE
gm023501_Glyma0 ------------------------SKVVFYDFLAQNKTD---------SSSSVASGITHE
                                        :* :*:**: :::*          **. .:**:* *

AT5G13180.1     IFSSSDEETSSCNSFR-------
gm023501_Glyma0 --SDEHEESSSSNTFPYTIRRKP
                  *...**:**.*:*
BoxShade v3.31 C (beta, 970507) Output
AT5G13180.1     M D N V K L V K N G V L R L P P G F R F H P T D E E L V V Q Y L K R K V C S S P L P A S I I P E F D V C R A D P W D L P
gm023501_Glyma0    M E K V N F V K N G E L R L P P G F R F H P T D E E L V L Q Y L K R K V F S C P L P A S I I P E L H V C K S D P W D L P
 
AT5G13180.1     G N L E K E R Y F F S T R E A K Y P N G N R S N R A T G S G Y W K A T G I D K R V V T S R G - N Q I V G L K K T L V F Y
gm023501_Glyma0    G D L E Q E R Y F F S T K V A K Y P N G N R S N R A T N S G Y W K A T G L D K Q I V T S K G N N Q V V G M K K T L V F Y
 
AT5G13180.1     K G K P P H G S R T D W I M H E Y R L - - - S S S P P S S M G P T Q N W V L C R I F L K K R A G N K N D D D D G D S R N
gm023501_Glyma0    R G K P P N G S R T D W I M H E Y R L I L N A S Q S Q S H V V P M E N W V L C R I F L K R R I G A K N - - - - G E E S N
 
AT5G13180.1     L R H N N N N N S S D Q I E I I T T D Q T D D K T K P I F F D F M R K E R T T D L N L L P S S P S S D H A S S G V T T E
gm023501_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - S K V V F Y D F L A Q N K T D - - - - - - - - - S S S S V A S G I T H E
 
AT5G13180.1     I F S S S D E E T S S C N S F R - - - - - - -
gm023501_Glyma0    - - S D E H E E S S S S N T F P Y T I R R K P
 
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