fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13220.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt010651 not found in 201aa AT5G13220.1 1st_not 0.443820224 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G13220.2     --MSKATIELDFLGLEKKQTNNAPKPKFQKFLDRRRSFRDIQGAISKIDPEIIKSLLAS-
pt010651_POPTR_ MKMSRGTVELDFFGMSKENRSSSSK---SKCFNRQRSFRDIQSAISKINPELLKSVIASG
                  **:.*:****:*:.*:: ..:.*   .* ::*:*******.*****:**::**::** 

AT5G13220.2     -------TGNNSDSSAKSRSVPSTPREDQPQIPISPVHASLARSSTELVSGTVPMTIFYN
pt010651_POPTR_ SASNKATPANGNQLSNKAFSVPSTPKQDLPPFPALPVYFPLPRLNLENPPETAPLTIFYN
                       ..*..: * *: ******::* * :*  **: .*.* . *  . *.*:*****

AT5G13220.2     GSVSVFQVSRNKAGEIMKVANEAASKKDESSMETDLSVILPTTLRPKLFGQNLEGDLPIA
pt010651_POPTR_ GTVAVFDVPRDKAENILKLAEKGFSK---TVVE---SVADPRTDHQQKLLESLDGDLPIA
                *:*:**:*.*:** :*:*:*::. **   : :*   **  * * : : : :.*:******

AT5G13220.2     RRKSLQRFLEKRKER---------------
pt010651_POPTR_ RRKSLQRFLEKRKERLTSATPYACTPKTRF
                ***************
BoxShade v3.31 C (beta, 970507) Output
AT5G13220.2     - - M S K A T I E L D F L G L E K K Q T N N A P K P K F Q K F L D R R R S F R D I Q G A I S K I D P E I I K S L L A S -
pt010651_POPTR_    M K M S R G T V E L D F F G M S K E N R S S S S K - - - S K C F N R Q R S F R D I Q S A I S K I N P E L L K S V I A S G
 
AT5G13220.2     - - - - - - - T G N N S D S S A K S R S V P S T P R E D Q P Q I P I S P V H A S L A R S S T E L V S G T V P M T I F Y N
pt010651_POPTR_    S A S N K A T P A N G N Q L S N K A F S V P S T P K Q D L P P F P A L P V Y F P L P R L N L E N P P E T A P L T I F Y N
 
AT5G13220.2     G S V S V F Q V S R N K A G E I M K V A N E A A S K K D E S S M E T D L S V I L P T T L R P K L F G Q N L E G D L P I A
pt010651_POPTR_    G T V A V F D V P R D K A E N I L K L A E K G F S K - - - T V V E - - - S V A D P R T D H Q Q K L L E S L D G D L P I A
 
AT5G13220.2     R R K S L Q R F L E K R K E R - - - - - - - - - - - - - - -
pt010651_POPTR_    R R K S L Q R F L E K R K E R L T S A T P Y A C T P K T R F
 
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