fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13220.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030761 not found in 196aa AT5G13220.1 not_not 0.432584269 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G13220.2     MSK-ATIELDFLGLEKKQTNNAPKPKFQKFLDRRRSFRDIQGAISKIDPEIIKSLLASTG
pt030761_POPTR_ MSRAAAVELDFFAMGKE---NKSSPSKSKFLNRQRSFRDIQSAISKINPELLKSVIASGS
                **: *::****:.: *:   * ..*. .***:*:*******.*****:**::**::** .

AT5G13220.2     --------NNSDSSAKSRSVPSTPREDQPQIPISPVHASLARSSTELVSGTVPMTIFYNG
pt030761_POPTR_ AATKTTPENGNQFSNKSFSVPSTPKQEQPSFPALPLYSPLPRPNMMIPPETAPLTIFYNG
                        *..: * ** ******:::**.:*  *:::.*.*..  : . *.*:******

AT5G13220.2     SVSVFQVSRNKAGEIMKVANEAASKKDESSMETDLSVILPTTLRPKLFGQNLEG-DLPIA
pt030761_POPTR_ TVAVFNVPRDKAENILKLAEKRISKTSAEPM-TD-----PKTDQQQLF-ESLDGADLPIA
                :*:**:*.*:** :*:*:*::  **.. ..* **     *.* : :** :.*:* *****

AT5G13220.2     RRKSLQRFLEKRKER-----------
pt030761_POPTR_ RRKSLQRFLEKRKGRLTSVSPYVCNT
                ************* *
BoxShade v3.31 C (beta, 970507) Output
AT5G13220.2     M S K - A T I E L D F L G L E K K Q T N N A P K P K F Q K F L D R R R S F R D I Q G A I S K I D P E I I K S L L A S T G
pt030761_POPTR_    M S R A A A V E L D F F A M G K E - - - N K S S P S K S K F L N R Q R S F R D I Q S A I S K I N P E L L K S V I A S G S
 
AT5G13220.2     - - - - - - - - N N S D S S A K S R S V P S T P R E D Q P Q I P I S P V H A S L A R S S T E L V S G T V P M T I F Y N G
pt030761_POPTR_    A A T K T T P E N G N Q F S N K S F S V P S T P K Q E Q P S F P A L P L Y S P L P R P N M M I P P E T A P L T I F Y N G
 
AT5G13220.2     S V S V F Q V S R N K A G E I M K V A N E A A S K K D E S S M E T D L S V I L P T T L R P K L F G Q N L E G - D L P I A
pt030761_POPTR_    T V A V F N V P R D K A E N I L K L A E K R I S K T S A E P M - T D - - - - - P K T D Q Q Q L F - E S L D G A D L P I A
 
AT5G13220.2     R R K S L Q R F L E K R K E R - - - - - - - - - - -
pt030761_POPTR_    R R K S L Q R F L E K R K G R L T S V S P Y V C N T
 
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