fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13220.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt010651 not found in 201aa AT5G13220.1 1st_not 0.443820224 II
Pt030761 not found in 196aa AT5G13220.1 not_not 0.432584269 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G13220.2     --MSK-ATIELDFLGLEKKQTNNAPKPKFQKFLDRRRSFRDIQGAISKIDPEIIKSLLAS
pt010651_POPTR_ MKMSR-GTVELDFFGMSKENRSSSSK---SKCFNRQRSFRDIQSAISKINPELLKSVIAS
pt030761_POPTR_ --MSRAAAVELDFFAMGKENKSSPSK---SKFLNRQRSFRDIQSAISKINPELLKSVIAS
                  **: .::****:.: *:: ....*   .* ::*:*******.*****:**::**::**

AT5G13220.2     TG--------NNSDSSAKSRSVPSTPREDQPQIPISPVHASLARSSTELVSGTVPMTIFY
pt010651_POPTR_ GSASNKATPANGNQLSNKAFSVPSTPKQDLPPFPALPVYFPLPRLNLENPPETAPLTIFY
pt030761_POPTR_ GSAATKTTPENGNQFSNKSFSVPSTPKQEQPSFPALPLYSPLPRPNMMIPPETAPLTIFY
                 .        *..: * *: ******::: * :*  *:: .*.* .    . *.*:****

AT5G13220.2     NGSVSVFQVSRNKAGEIMKVANEAASKKDESSMETDLSVILPTTL-RPKLFGQNLEG-DL
pt010651_POPTR_ NGTVAVFDVPRDKAENILKLAEKGFSKTVVESV-AD-----PRTDHQQKLL-ESLDG-DL
pt030761_POPTR_ NGTVAVFNVPRDKAENILKLAEKRISKTSAEPM-TD-----PKTD-QQQLF-ESLDGADL
                **:*:**:*.*:** :*:*:*::  **.  ..: :*     * *  : :*: :.*:* **

AT5G13220.2     PIARRKSLQRFLEKRKER---------------
pt010651_POPTR_ PIARRKSLQRFLEKRKERLTSATPYACTPKTRF
pt030761_POPTR_ PIARRKSLQRFLEKRKGRLTSVSPYVCNT----
                **************** *
BoxShade v3.31 C (beta, 970507) Output
AT5G13220.2     - - M S K - A T I E L D F L G L E K K Q T N N A P K P K F Q K F L D R R R S F R D I Q G A I S K I D P E I I K S L L A S
pt010651_POPTR_    M K M S R - G T V E L D F F G M S K E N R S S S S K - - - S K C F N R Q R S F R D I Q S A I S K I N P E L L K S V I A S
pt030761_POPTR_    - - M S R A A A V E L D F F A M G K E N K S S P S K - - - S K F L N R Q R S F R D I Q S A I S K I N P E L L K S V I A S
 
AT5G13220.2     T G - - - - - - - - N N S D S S A K S R S V P S T P R E D Q P Q I P I S P V H A S L A R S S T E L V S G T V P M T I F Y
pt010651_POPTR_    G S A S N K A T P A N G N Q L S N K A F S V P S T P K Q D L P P F P A L P V Y F P L P R L N L E N P P E T A P L T I F Y
pt030761_POPTR_    G S A A T K T T P E N G N Q F S N K S F S V P S T P K Q E Q P S F P A L P L Y S P L P R P N M M I P P E T A P L T I F Y
 
AT5G13220.2     N G S V S V F Q V S R N K A G E I M K V A N E A A S K K D E S S M E T D L S V I L P T T L - R P K L F G Q N L E G - D L
pt010651_POPTR_    N G T V A V F D V P R D K A E N I L K L A E K G F S K T V V E S V - A D - - - - - P R T D H Q Q K L L - E S L D G - D L
pt030761_POPTR_    N G T V A V F N V P R D K A E N I L K L A E K R I S K T S A E P M - T D - - - - - P K T D - Q Q Q L F - E S L D G A D L
 
AT5G13220.2     P I A R R K S L Q R F L E K R K E R - - - - - - - - - - - - - - -
pt010651_POPTR_    P I A R R K S L Q R F L E K R K E R L T S A T P Y A C T P K T R F
pt030761_POPTR_    P I A R R K S L Q R F L E K R K G R L T S V S P Y V C N T - - - -
 
0