fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032408 not found in 231aa AT5G13330.1 not_1st 0.470588235 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G13330.1     ---MVSALSRVIENPTD---PPVK-------QELDKS--DQHQPDQDQ--PRRRHYRGVR
pt032408_POPTR_ MSSMVSALTQAM-GTTDNNVPTVQSTPFALHQSVVKGEPDQSQPVQDQENTRRRHYRGVR
                   *****::.: ..**   *.*:       *.: *.  ** ** ***  .*********

AT5G13330.1     QRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQ----
pt032408_POPTR_ QRPWGKWAAEIRDPKKAARVWLGTFDTAEDAAVAYDKAALKFKGSKAKLNFPERVHEFGY
                *************************:***:**:***:*******:**********:    

AT5G13330.1     ----GPTTTTTISHAPRGVSESMNSPPPRPGPPSTTTTSWPMTYNQDILQYAQLLTSNNE
pt032408_POPTR_ FMSSGASSNVMTEQNPRPV-----APPPPP-PSSFAPDTYP-----DLLQYAQILSS-ND
                    *.::..  .: ** *     :*** * *.* :. ::*     *:*****:*:* *:

AT5G13330.1     VDLSYYTSTLFS-QPFSTPSSSSSSSQQTQQQQLQQQQQ-----------QREEEEKNYG
pt032408_POPTR_ ANFPYYTSNLFNQQPFPGHFSQSFLS----QQQLNQQQEDLMRFSSRFDGSSSSDQQEHG
                .::.****.**. ***.   *.*  *    ****:***:           . ..:::::*

AT5G13330.1     YNYYNYPRE
pt032408_POPTR_ KGSSN-PSE
                 .  * * *
BoxShade v3.31 C (beta, 970507) Output
AT5G13330.1     - - - M V S A L S R V I E N P T D - - - P P V K - - - - - - - Q E L D K S - - D Q H Q P D Q D Q - - P R R R H Y R G V R
pt032408_POPTR_    M S S M V S A L T Q A M - G T T D N N V P T V Q S T P F A L H Q S V V K G E P D Q S Q P V Q D Q E N T R R R H Y R G V R
 
AT5G13330.1     Q R P W G K W A A E I R D P K K A A R V W L G T F E T A E E A A L A Y D R A A L K F K G T K A K L N F P E R V Q - - - -
pt032408_POPTR_    Q R P W G K W A A E I R D P K K A A R V W L G T F D T A E D A A V A Y D K A A L K F K G S K A K L N F P E R V H E F G Y
 
AT5G13330.1     - - - - G P T T T T T I S H A P R G V S E S M N S P P P R P G P P S T T T T S W P M T Y N Q D I L Q Y A Q L L T S N N E
pt032408_POPTR_    F M S S G A S S N V M T E Q N P R P V - - - - - A P P P P P - P S S F A P D T Y P - - - - - D L L Q Y A Q I L S S - N D
 
AT5G13330.1     V D L S Y Y T S T L F S - Q P F S T P S S S S S S S Q Q T Q Q Q Q L Q Q Q Q Q - - - - - - - - - - - Q R E E E E K N Y G
pt032408_POPTR_    A N F P Y Y T S N L F N Q Q P F P G H F S Q S F L S - - - - Q Q Q L N Q Q Q E D L M R F S S R F D G S S S S D Q Q E H G
 
AT5G13330.1     Y N Y Y N Y P R E
pt032408_POPTR_    K G S S N - P S E
 
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