fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011749 not found in 234aa AT5G13330.1 1st_1st 0.497737556 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G13330.1     ---MVSALSRVI----ENPT---------DPPVKQELDKSDQHQPDQDQ--PRRRHYRGV
pt011749_POPTR_ MSAMVSALTQVMGTTDNNPTSVQSTPYALDQSVVK--DEPDQSQPVQDQENTRRRHYRGV
                   *****::*:    :***         * .* :  *:.** ** ***  .********

AT5G13330.1     RQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPT
pt011749_POPTR_ RQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAAVAYDKAALKFKGTKAKLNFPERVQGRT
                **************************:***:**:***:******************** *

AT5G13330.1     ---------TTTTI--SHAPRGVSESMNSPPPRPGPPSTTTTSWPMTYNQDILQYAQLLT
pt011749_POPTR_ EFGYYMGSGTSTNVLTEQSPRPVAP---PPPPPPPPPSSFA---PDTY-PDLLQYAQILS
                         *:*.:  .::** *:    .*** * ***: :   * **  *:*****:*:

AT5G13330.1     SNNEVDLSYYTSTLFS-QPFSTPSSSSSSSQQTQQQQLQ----------QQQQQREEEEK
pt011749_POPTR_ S-NDANFPYYTSNLFNQQPFAPHYSSSFLSQQQQQDLMRFSSRFDSSSSSDQQEHGKDSS
                * *:.::.****.**. ***:.  ***  *** **: ::          .:**:: ::..

AT5G13330.1     NYGYNYYNYPRE
pt011749_POPTR_ N--------PSE
                *        * *
BoxShade v3.31 C (beta, 970507) Output
AT5G13330.1     - - - M V S A L S R V I - - - - E N P T - - - - - - - - - D P P V K Q E L D K S D Q H Q P D Q D Q - - P R R R H Y R G V
pt011749_POPTR_    M S A M V S A L T Q V M G T T D N N P T S V Q S T P Y A L D Q S V V K - - D E P D Q S Q P V Q D Q E N T R R R H Y R G V
 
AT5G13330.1     R Q R P W G K W A A E I R D P K K A A R V W L G T F E T A E E A A L A Y D R A A L K F K G T K A K L N F P E R V Q G P T
pt011749_POPTR_    R Q R P W G K W A A E I R D P K K A A R V W L G T F D T A E D A A V A Y D K A A L K F K G T K A K L N F P E R V Q G R T
 
AT5G13330.1     - - - - - - - - - T T T T I - - S H A P R G V S E S M N S P P P R P G P P S T T T T S W P M T Y N Q D I L Q Y A Q L L T
pt011749_POPTR_    E F G Y Y M G S G T S T N V L T E Q S P R P V A P - - - P P P P P P P P P S S F A - - - P D T Y - P D L L Q Y A Q I L S
 
AT5G13330.1     S N N E V D L S Y Y T S T L F S - Q P F S T P S S S S S S S Q Q T Q Q Q Q L Q - - - - - - - - - - Q Q Q Q Q R E E E E K
pt011749_POPTR_    S - N D A N F P Y Y T S N L F N Q Q P F A P H Y S S S F L S Q Q Q Q Q D L M R F S S R F D S S S S S D Q Q E H G K D S S
 
AT5G13330.1     N Y G Y N Y Y N Y P R E
pt011749_POPTR_    N - - - - - - - - P S E
 
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