fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb016161 not found in 278aa AT5G07310.1 not_not 0.438914027 III
Sb006216 not found in 227aa AT5G61890.1 not_not 0.416289592 III
Sb016685 not found in 420aa AT1G43160.1 not_not 0.416289592 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G13330.1     ------------------------------------------------------------
Sb006216_Sorbi1 MHGQRGVVGSRSPPRHGREVPKVEPAA---------GLGGRG---------------FLG
Sb016685_Sorbi1 -MCHAAVANSGEQEHQRRRRPLAVAAAVAAAADDDDGGGGRGQPLPGEPHAIDTAGAVSS
Sb016161_Sorbi1 --PDTYVKNQRTIEEYSYGRCLARAAAAHASVD--------------RPREI--------
                                                                            

AT5G13330.1     -----------------------MVSALSRVIENPTDP----------------------
Sb006216_Sorbi1 HSYSAA---------RADYDVAVMAAALTHVVCGATEP----------------------
Sb016685_Sorbi1 SSSSSAAAAAPWQSSRQSREMSAMVAALAKVVAGSAPPAAAEEPALAQEDASMDEAWW--
Sb016161_Sorbi1 ---SAAAAAAHQQGARRDE---------AQAAAGGS-----------------GGVWWRP
                                            ::.  . :                        

AT5G13330.1     PVKQE-----------------------------------LDKSDQH-------------
Sb006216_Sorbi1 PRGGE-------TAAAAALPPG------------------PRRQDAGG------------
Sb016685_Sorbi1 PY--EDLHVAEPSSPARFVLHGYGATEPSEQYWPAAAATYSHSQSQHGAASAATDDELPS
Sb016161_Sorbi1 PLRAEDEHAVIVAALAHVVGEG------------------RQAQQQQ-----------PP
                *   *                                      ..               

AT5G13330.1     ----------------QPDQDQPRRR--HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFE
Sb006216_Sorbi1 -----GGGATSTTELQARAQ--------QYRGVRRRPWGKWAAEIRDPEKAARVWLGTFA
Sb016685_Sorbi1 PTSAVGGSTSTSTSSRARAAAPVRNK--RYRGVRQRPWGKWAAEIRDPHKAARVWLGTFD
Sb016161_Sorbi1 PVLGHGQQVMHRT---APAVEPPQQQRLRYRGVRQRPWGKWAAEIRDPVKAARVWLGTFD
                                            :*****:************* ********** 

AT5G13330.1     TAEEAALAYDRAALKFKGTKAKLNFPE----RVQGPTTTTTISHAPRG------VSESMN
Sb006216_Sorbi1 TPEEAARAYDDAARRFKGAKAKLNF----------PTTTTTAS-----------SSSSAT
Sb016685_Sorbi1 TAEDAARAYDAAALRFRGSRAKLNFPESATLPFSTPPPPATATHHHQQQPPLTPASRALT
Sb016161_Sorbi1 TAEDAARAYDAAALRFKGAKAKLNF------PFQQPATTATAS-----------TSATLA
                *.*:** *** ** :*:*::*****          *...:* :            * :  

AT5G13330.1     SPPPRPGPPST--TTTSWPMTYNQ---DILQ-YAQLLTSNNEVDLSYYTSTLFSQPFS--
Sb006216_Sorbi1 ETVE---------------------EFPDLGQYLHILQSSDDVDV---------RAVA-A
Sb016685_Sorbi1 TTPPPLARPEALLESQALPAGGGSRD-PYLD-YARFLQSGGD-----------------G
Sb016161_Sorbi1 PTPRQGTRHAA-----AAPAGAHQQEFPDLSRYAHILQSGGDLDL---------QAFSGA
                 .                           *  * ::* *..:                  

AT5G13330.1     ---TPSSSSSSSQQT---------------------QQQQLQ-------QQQQQREEEEK
Sb006216_Sorbi1 G--LPLMNR--------LPPP--------------GDGQ---------------------
Sb016685_Sorbi1 GGGDPSASSGTPAPSVTLPPPPAVPASAAAAYGFGGEGETLRGYGYLSPPPQRQSSAEPG
Sb016161_Sorbi1 GGLTPGRSSTTTASA---------------------------------------------
                    *  .                                                    

AT5G13330.1     NY------GYNYYNYPRE------------
Sb006216_Sorbi1 --------GQDHGSSGR-------------
Sb016685_Sorbi1 NHPPAAWAGFYSSSYPPPP---W-PWDQSG
Sb016161_Sorbi1 -----------SSSSPPAPSVDWFPWRGPA
                             .
BoxShade v3.31 C (beta, 970507) Output
AT5G13330.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb006216_Sorbi1    M H G Q R G V V G S R S P P R H G R E V P K V E P A A - - - - - - - - - G L G G R G - - - - - - - - - - - - - - - F L G
Sb016685_Sorbi1    - M C H A A V A N S G E Q E H Q R R R R P L A V A A A V A A A A D D D D G G G G R G Q P L P G E P H A I D T A G A V S S
Sb016161_Sorbi1    - - P D T Y V K N Q R T I E E Y S Y G R C L A R A A A A H A S V D - - - - - - - - - - - - - - R P R E I - - - - - - - -
 
AT5G13330.1     - - - - - - - - - - - - - - - - - - - - - - - M V S A L S R V I E N P T D P - - - - - - - - - - - - - - - - - - - - - -
Sb006216_Sorbi1    H S Y S A A - - - - - - - - - R A D Y D V A V M A A A L T H V V C G A T E P - - - - - - - - - - - - - - - - - - - - - -
Sb016685_Sorbi1    S S S S S A A A A A P W Q S S R Q S R E M S A M V A A L A K V V A G S A P P A A A E E P A L A Q E D A S M D E A W W - -
Sb016161_Sorbi1    - - - S A A A A A A H Q Q G A R R D E - - - - - - - - - A Q A A A G G S - - - - - - - - - - - - - - - - - G G V W W R P
 
AT5G13330.1     P V K Q E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L D K S D Q H - - - - - - - - - - - - -
Sb006216_Sorbi1    P R G G E - - - - - - - T A A A A A L P P G - - - - - - - - - - - - - - - - - - P R R Q D A G G - - - - - - - - - - - -
Sb016685_Sorbi1    P Y - - E D L H V A E P S S P A R F V L H G Y G A T E P S E Q Y W P A A A A T Y S H S Q S Q H G A A S A A T D D E L P S
Sb016161_Sorbi1    P L R A E D E H A V I V A A L A H V V G E G - - - - - - - - - - - - - - - - - - R Q A Q Q Q Q - - - - - - - - - - - P P
 
AT5G13330.1     - - - - - - - - - - - - - - - - Q P D Q D Q P R R R - - H Y R G V R Q R P W G K W A A E I R D P K K A A R V W L G T F E
Sb006216_Sorbi1    - - - - - G G G A T S T T E L Q A R A Q - - - - - - - - Q Y R G V R R R P W G K W A A E I R D P E K A A R V W L G T F A
Sb016685_Sorbi1    P T S A V G G S T S T S T S S R A R A A A P V R N K - - R Y R G V R Q R P W G K W A A E I R D P H K A A R V W L G T F D
Sb016161_Sorbi1    P V L G H G Q Q V M H R T - - - A P A V E P P Q Q Q R L R Y R G V R Q R P W G K W A A E I R D P V K A A R V W L G T F D
 
AT5G13330.1     T A E E A A L A Y D R A A L K F K G T K A K L N F P E - - - - R V Q G P T T T T T I S H A P R G - - - - - - V S E S M N
Sb006216_Sorbi1    T P E E A A R A Y D D A A R R F K G A K A K L N F - - - - - - - - - - P T T T T T A S - - - - - - - - - - - S S S S A T
Sb016685_Sorbi1    T A E D A A R A Y D A A A L R F R G S R A K L N F P E S A T L P F S T P P P P A T A T H H H Q Q Q P P L T P A S R A L T
Sb016161_Sorbi1    T A E D A A R A Y D A A A L R F K G A K A K L N F - - - - - - P F Q Q P A T T A T A S - - - - - - - - - - - T S A T L A
 
AT5G13330.1     S P P P R P G P P S T - - T T T S W P M T Y N Q - - - D I L Q - Y A Q L L T S N N E V D L S Y Y T S T L F S Q P F S - -
Sb006216_Sorbi1    E T V E - - - - - - - - - - - - - - - - - - - - - E F P D L G Q Y L H I L Q S S D D V D V - - - - - - - - - R A V A - A
Sb016685_Sorbi1    T T P P P L A R P E A L L E S Q A L P A G G G S R D - P Y L D - Y A R F L Q S G G D - - - - - - - - - - - - - - - - - G
Sb016161_Sorbi1    P T P R Q G T R H A A - - - - - A A P A G A H Q Q E F P D L S R Y A H I L Q S G G D L D L - - - - - - - - - Q A F S G A
 
AT5G13330.1     - - - T P S S S S S S S Q Q T - - - - - - - - - - - - - - - - - - - - - Q Q Q Q L Q - - - - - - - Q Q Q Q Q R E E E E K
Sb006216_Sorbi1    G - - L P L M N R - - - - - - - - L P P P - - - - - - - - - - - - - - G D G Q - - - - - - - - - - - - - - - - - - - - -
Sb016685_Sorbi1    G G G D P S A S S G T P A P S V T L P P P P A V P A S A A A A Y G F G G E G E T L R G Y G Y L S P P P Q R Q S S A E P G
Sb016161_Sorbi1    G G L T P G R S S T T T A S A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G13330.1     N Y - - - - - - G Y N Y Y N Y P R E - - - - - - - - - - - -
Sb006216_Sorbi1    - - - - - - - - G Q D H G S S G R - - - - - - - - - - - - -
Sb016685_Sorbi1    N H P P A A W A G F Y S S S Y P P P P - - - W - P W D Q S G
Sb016161_Sorbi1    - - - - - - - - - - - S S S S P P A P S V D W F P W R G P A
 
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