fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13330.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010425 not found in 247aa AT5G13330.1 1st_1st 0.443438914 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G13330.1     MVSALSRVIENPTDPPVKQELDKSDQH-----------------------QPDQDQPRRR
Sb010425_Sorbi1 --------MDATAVPPVAT--GGSPHHRVPLEAGAAAGGSSAAGQAAVEVEEGTSTTTMR
                        :: .: ***    . * :*                       : . . .  *

AT5G13330.1     HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPER
Sb010425_Sorbi1 HYRGVRRRPWGKWAAEIRDPAKAARVWLGTFDTAEAAAAAYDDAALRFKGAKAKLNFPER
                ******:************* **********:*** ** *** ***:***:*********

AT5G13330.1     VQGPTTTTTISHAPRGVSE----SMNSPPPRPGPPSTTTTSWPMTYNQDILQYAQLLTSN
Sb010425_Sorbi1 VRGRTGQGAFLVSP-GIPQPPPPPVSAPPLLPLPPSS-----PVPF-PDLMRYAQLLHSG
                *:* *   ::  :* *:.:    .:.:**  * ***:     *:.:  *:::***** *.

AT5G13330.1     NEVDLSYYTSTLFSQPFSTPSSSS-SSSQQTQQQQLQQQQQQR-----------------
Sb010425_Sorbi1 NVVASS-------TGDLAAPSSSSQASSSSVQILDFSTRQLLRASPPSTFGRPPMLTSAS
                * *  *       :  :::***** :**...*  ::. :*  *                 

AT5G13330.1     --------------EEEEKNYGYNYYNYPRE
Sb010425_Sorbi1 MSMSSSTSMSVPHVEANDSGVGEETGTAPPD
                              * ::.. * :  . * :
BoxShade v3.31 C (beta, 970507) Output
AT5G13330.1     M V S A L S R V I E N P T D P P V K Q E L D K S D Q H - - - - - - - - - - - - - - - - - - - - - - - Q P D Q D Q P R R R
Sb010425_Sorbi1    - - - - - - - - M D A T A V P P V A T - - G G S P H H R V P L E A G A A A G G S S A A G Q A A V E V E E G T S T T T M R
 
AT5G13330.1     H Y R G V R Q R P W G K W A A E I R D P K K A A R V W L G T F E T A E E A A L A Y D R A A L K F K G T K A K L N F P E R
Sb010425_Sorbi1    H Y R G V R R R P W G K W A A E I R D P A K A A R V W L G T F D T A E A A A A A Y D D A A L R F K G A K A K L N F P E R
 
AT5G13330.1     V Q G P T T T T T I S H A P R G V S E - - - - S M N S P P P R P G P P S T T T T S W P M T Y N Q D I L Q Y A Q L L T S N
Sb010425_Sorbi1    V R G R T G Q G A F L V S P - G I P Q P P P P P V S A P P L L P L P P S S - - - - - P V P F - P D L M R Y A Q L L H S G
 
AT5G13330.1     N E V D L S Y Y T S T L F S Q P F S T P S S S S - S S S Q Q T Q Q Q Q L Q Q Q Q Q Q R - - - - - - - - - - - - - - - - -
Sb010425_Sorbi1    N V V A S S - - - - - - - T G D L A A P S S S S Q A S S S S V Q I L D F S T R Q L L R A S P P S T F G R P P M L T S A S
 
AT5G13330.1     - - - - - - - - - - - - - - E E E E K N Y G Y N Y Y N Y P R E
Sb010425_Sorbi1    M S M S S S T S M S V P H V E A N D S G V G E E T G T A P P D
 
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