fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13910.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os017112 not found in 292aa AT5G13910.1 1st_1st 0.328813559 Ib
Sb013761 not found in 286aa AT5G13910.1 1st_1st 0.332203389 Ib
Pt030853 not found in 274aa AT5G13910.1 1st_1st 0.355932203 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G13910.1     -MN------------------------TTSSKSKKKQDDQVG-------TRFLGVRRRPW
Sb013761_Sorbi1 -MNFSSYFFSSSSSSS-------EKKSSSSSSKQRRQQQQQAQPDANT-TRYLGVRRRPW
pt030853_POPTR_ -MN------------------------PSSSNRKKKQPQQVQQEPGTG-LRFLGVRRRPW
Os017112_Os04t0 MMNFSSYFYSSSAAAAGGGGGGGEKKSSSSSASKKKQQQAAAAEGGNNQTRYLGVRRRPW
                 **                        .:**  :::* :           *:********

AT5G13910.1     GRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAARSMRGTRARTNFVYSDMPPSSSVTS
Sb013761_Sorbi1 GRYAAEIRDPATKERHWLGTFDTAEEAAVAYDRAARSLRGARARTNFAYPDLPPGSSITP
pt030853_POPTR_ GRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYSDMPAGSFVTS
Os017112_Os04t0 GRYAAEIRDPATKERHWLGTFDTAEEAAVAYDRAARSLRGARARTNFAYPDLPPGSSVTP
                **********:*****************:********:**:******.*.*:*..* :*.

AT5G13910.1     IVSPD---------------------------DPPPP----PPPPAP-------------
Sb013761_Sorbi1 YLSPDL----------TSGDNATQLLQPFYAADPAAASSLQAAAAAP-------------
pt030853_POPTR_ IISPDEQQSLQQQQHQQHSDNNNNLSSLFINVPPSHD---HQPDSTPIFNQDFSSQCHLE
Os017112_Os04t0 YLSPDL-----------SADASDQLLQPFY-ANPSAA----AALPTP-------------
                 :***                            *.       . .:*             

AT5G13910.1     ---PS---------------------NDPVDYMMMFNQYSSTDSPMLQPHC---------
Sb013761_Sorbi1 ---PAANAGAG-------YGYGAGAGDDYYASAYGYNDYSAEDMSALMDDL-AIPDDLTA
pt030853_POPTR_ EGFSSMTSGGG------------------FWSCSSNNTYNQQLKHVIQNNV--LPHDFPS
Os017112_Os04t0 ---AAVMAGGGGVEFGGEYMYGGGV-----------------DMSSLMDDIAAMPDDLPP
                   .:                                         :  .          

AT5G13910.1     -------------DQVDSYMFGGSQSSNS-------------YCYSNDSSNELPPLPSDL
Sb013761_Sorbi1 EDAGG---------SVDMYSGGGGGGSGSANASSGSGGGG--WCDASEFSAYGGASSAA-
pt030853_POPTR_ NISHSSDYNMSQCSWTDSSTSGLMGFEDQTTMTSGFESVGS-------------------
Os017112_Os04t0 SVTGGG----GGFASSDEYSSGGGGMVDDVSMYCGGNGGGSSWCDASDFASYSSSSPAAA
                                *    *     ..                               

AT5G13910.1     ----SNSCYSQPQWTWTGDDYSSE-YVHSPMFSRMPPVSDSFPQGFNYFGS------
Sb013761_Sorbi1 ----SHGVY-----------FEEG-YVHSPLFSPMPAVDDACADGFQLGGSSSSYYY
pt030853_POPTR_ ----SSGSY-------FG--FDSGEYVHSPLFSRMPPVSDMVPDGFDLGSS--AYFF
Os017112_Os04t0 AAAGSHGMY-----------FEEG-YVHSPLFSPMPAVDDAGADGFQLGGSSSSYYY
                    * . *           :..  *****:** **.*.*  .:**:  .*
BoxShade v3.31 C (beta, 970507) Output
AT5G13910.1     - M N - - - - - - - - - - - - - - - - - - - - - - - - T T S S K S K K K Q D D Q V G - - - - - - - T R F L G V R R R P W
Sb013761_Sorbi1    - M N F S S Y F F S S S S S S S - - - - - - - E K K S S S S S S K Q R R Q Q Q Q Q A Q P D A N T - T R Y L G V R R R P W
pt030853_POPTR_    - M N - - - - - - - - - - - - - - - - - - - - - - - - P S S S N R K K K Q P Q Q V Q Q E P G T G - L R F L G V R R R P W
Os017112_Os04t0    M M N F S S Y F Y S S S A A A A G G G G G G G E K K S S S S S A S K K K Q Q Q A A A A E G G N N Q T R Y L G V R R R P W
 
AT5G13910.1     G R Y A A E I R D P T T K E R H W L G T F D T A E E A A L A Y D R A A R S M R G T R A R T N F V Y S D M P P S S S V T S
Sb013761_Sorbi1    G R Y A A E I R D P A T K E R H W L G T F D T A E E A A V A Y D R A A R S L R G A R A R T N F A Y P D L P P G S S I T P
pt030853_POPTR_    G R Y A A E I R D P S T K E R H W L G T F D T A E E A A L A Y D R A A R S M R G S R A R T N F V Y S D M P A G S F V T S
Os017112_Os04t0    G R Y A A E I R D P A T K E R H W L G T F D T A E E A A V A Y D R A A R S L R G A R A R T N F A Y P D L P P G S S V T P
 
AT5G13910.1     I V S P D - - - - - - - - - - - - - - - - - - - - - - - - - - - D P P P P - - - - P P P P A P - - - - - - - - - - - - -
Sb013761_Sorbi1    Y L S P D L - - - - - - - - - - T S G D N A T Q L L Q P F Y A A D P A A A S S L Q A A A A A P - - - - - - - - - - - - -
pt030853_POPTR_    I I S P D E Q Q S L Q Q Q Q H Q Q H S D N N N N L S S L F I N V P P S H D - - - H Q P D S T P I F N Q D F S S Q C H L E
Os017112_Os04t0    Y L S P D L - - - - - - - - - - - S A D A S D Q L L Q P F Y - A N P S A A - - - - A A L P T P - - - - - - - - - - - - -
 
AT5G13910.1     - - - P S - - - - - - - - - - - - - - - - - - - - - N D P V D Y M M M F N Q Y S S T D S P M L Q P H C - - - - - - - - -
Sb013761_Sorbi1    - - - P A A N A G A G - - - - - - - Y G Y G A G A G D D Y Y A S A Y G Y N D Y S A E D M S A L M D D L - A I P D D L T A
pt030853_POPTR_    E G F S S M T S G G G - - - - - - - - - - - - - - - - - - F W S C S S N N T Y N Q Q L K H V I Q N N V - - L P H D F P S
Os017112_Os04t0    - - - A A V M A G G G G V E F G G E Y M Y G G G V - - - - - - - - - - - - - - - - - D M S S L M D D I A A M P D D L P P
 
AT5G13910.1     - - - - - - - - - - - - - D Q V D S Y M F G G S Q S S N S - - - - - - - - - - - - - Y C Y S N D S S N E L P P L P S D L
Sb013761_Sorbi1    E D A G G - - - - - - - - - S V D M Y S G G G G G G S G S A N A S S G S G G G G - - W C D A S E F S A Y G G A S S A A -
pt030853_POPTR_    N I S H S S D Y N M S Q C S W T D S S T S G L M G F E D Q T T M T S G F E S V G S - - - - - - - - - - - - - - - - - - -
Os017112_Os04t0    S V T G G G - - - - G G F A S S D E Y S S G G G G M V D D V S M Y C G G N G G G S S W C D A S D F A S Y S S S S P A A A
 
AT5G13910.1     - - - - S N S C Y S Q P Q W T W T G D D Y S S E - Y V H S P M F S R M P P V S D S F P Q G F N Y F G S - - - - - -
Sb013761_Sorbi1    - - - - S H G V Y - - - - - - - - - - - F E E G - Y V H S P L F S P M P A V D D A C A D G F Q L G G S S S S Y Y Y
pt030853_POPTR_    - - - - S S G S Y - - - - - - - F G - - F D S G E Y V H S P L F S R M P P V S D M V P D G F D L G S S - - A Y F F
Os017112_Os04t0    A A A G S H G M Y - - - - - - - - - - - F E E G - Y V H S P L F S P M P A V D D A G A D G F Q L G G S S S S Y Y Y
 
0