fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13910.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030853 not found in 274aa AT5G13910.1 1st_1st 0.355932203 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G13910.1     MNTTSSKSKKKQDDQV------GTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEE
pt030853_POPTR_ MNPSSSNRKKKQPQQVQQEPGTGLRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEE
                **.:**: **** :**      * ********************:***************

AT5G13910.1     AALAYDRAARSMRGTRARTNFVYSDMPPSSSVTSIVSPDDPPP-----------------
pt030853_POPTR_ AALAYDRAARSMRGSRARTNFVYSDMPAGSFVTSIISPDEQQSLQQQQHQQHSDNNNNLS
                **************:************..* ****:***:  .                 

AT5G13910.1     ------PPPPPAPPSNDPVDYMMMFNQ-YSSTDSPMLQPHCDQVDSYMF--GGSQSSNSY
pt030853_POPTR_ SLFINVPPSHDHQPDSTPI-----FNQDFSS------QCHLEEGFSSMTSGGGFWS----
                      **.    *.. *:     *** :**      * * ::  * *   **  *    

AT5G13910.1     CYSNDSSNE----------LP-PLPSDLSNSC-YSQPQWTWT------------------
pt030853_POPTR_ CSSNNTYNQQLKHVIQNNVLPHDFPSNISHSSDYNMSQCSWTDSSTSGLMGFEDQTTMTS
                * **:: *:          **  :**::*:*. *. .* :**                  

AT5G13910.1     -------------GDDYSSEYVHSPMFSRMPPVSDSFPQGFNYFGS-----
pt030853_POPTR_ GFESVGSSSGSYFGFD-SGEYVHSPLFSRMPPVSDMVPDGFD-LGSSAYFF
                             * * *.******:********* .*:**: :**
BoxShade v3.31 C (beta, 970507) Output
AT5G13910.1     M N T T S S K S K K K Q D D Q V - - - - - - G T R F L G V R R R P W G R Y A A E I R D P T T K E R H W L G T F D T A E E
pt030853_POPTR_    M N P S S S N R K K K Q P Q Q V Q Q E P G T G L R F L G V R R R P W G R Y A A E I R D P S T K E R H W L G T F D T A E E
 
AT5G13910.1     A A L A Y D R A A R S M R G T R A R T N F V Y S D M P P S S S V T S I V S P D D P P P - - - - - - - - - - - - - - - - -
pt030853_POPTR_    A A L A Y D R A A R S M R G S R A R T N F V Y S D M P A G S F V T S I I S P D E Q Q S L Q Q Q Q H Q Q H S D N N N N L S
 
AT5G13910.1     - - - - - - P P P P P A P P S N D P V D Y M M M F N Q - Y S S T D S P M L Q P H C D Q V D S Y M F - - G G S Q S S N S Y
pt030853_POPTR_    S L F I N V P P S H D H Q P D S T P I - - - - - F N Q D F S S - - - - - - Q C H L E E G F S S M T S G G G F W S - - - -
 
AT5G13910.1     C Y S N D S S N E - - - - - - - - - - L P - P L P S D L S N S C - Y S Q P Q W T W T - - - - - - - - - - - - - - - - - -
pt030853_POPTR_    C S S N N T Y N Q Q L K H V I Q N N V L P H D F P S N I S H S S D Y N M S Q C S W T D S S T S G L M G F E D Q T T M T S
 
AT5G13910.1     - - - - - - - - - - - - - G D D Y S S E Y V H S P M F S R M P P V S D S F P Q G F N Y F G S - - - - -
pt030853_POPTR_    G F E S V G S S S G S Y F G F D - S G E Y V H S P L F S R M P P V S D M V P D G F D - L G S S A Y F F
 
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