fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G13910.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os017112 not found in 292aa AT5G13910.1 1st_1st 0.328813559 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G13910.1     -MN------------------------TTSSKSKKKQDDQVG-------TRFLGVRRRPW
Os017112_Os04t0 MMNFSSYFYSSSAAAAGGGGGGGEKKSSSSSASKKKQQQAAAAEGGNNQTRYLGVRRRPW
                 **                        ::** *****:: ..       **:********

AT5G13910.1     GRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAARSMRGTRARTNFVYSDMPPSSSVTS
Os017112_Os04t0 GRYAAEIRDPATKERHWLGTFDTAEEAAVAYDRAARSLRGARARTNFAYPDLPPGSSVTP
                **********:*****************:********:**:******.*.*:**.****.

AT5G13910.1     IVSPD---------------DPP-----PPP-----------------------------
Os017112_Os04t0 YLSPDLSADASDQLLQPFYANPSAAAALPTPAAVMAGGGGVEFGGEYMYGGGVDMSSLMD
                 :***               :*.     *.*                             

AT5G13910.1     -----PPPAPP----------SNDPVDYMMMFNQYSSTDSPMLQPHCDQVDSYMFGGSQS
Os017112_Os04t0 DIAAMPDDLPPSVTGGGGGFASSD---------EYSSGGGGMV----DDVSMYC-GGNGG
                     *   **          *.*         :*** .. *:    *:*. *  **. .

AT5G13910.1     SNSYCYSND--SSNELPPLPSDLSNSCYSQPQWTWTGDDYSSEYVHSPMFSRMPPVSDSF
Os017112_Os04t0 GSSWCDASDFASYSSSSPAAAAAAGS---------HGMYFEEGYVHSPLFSPMPAVDDAG
                ..*:* :.*  * .. .* .:  :.*          *  :.. *****:** **.*.*: 

AT5G13910.1     PQGFNYFGS------
Os017112_Os04t0 ADGFQLGGSSSSYYY
                .:**:  **
BoxShade v3.31 C (beta, 970507) Output
AT5G13910.1     - M N - - - - - - - - - - - - - - - - - - - - - - - - T T S S K S K K K Q D D Q V G - - - - - - - T R F L G V R R R P W
Os017112_Os04t0    M M N F S S Y F Y S S S A A A A G G G G G G G E K K S S S S S A S K K K Q Q Q A A A A E G G N N Q T R Y L G V R R R P W
 
AT5G13910.1     G R Y A A E I R D P T T K E R H W L G T F D T A E E A A L A Y D R A A R S M R G T R A R T N F V Y S D M P P S S S V T S
Os017112_Os04t0    G R Y A A E I R D P A T K E R H W L G T F D T A E E A A V A Y D R A A R S L R G A R A R T N F A Y P D L P P G S S V T P
 
AT5G13910.1     I V S P D - - - - - - - - - - - - - - - D P P - - - - - P P P - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os017112_Os04t0    Y L S P D L S A D A S D Q L L Q P F Y A N P S A A A A L P T P A A V M A G G G G V E F G G E Y M Y G G G V D M S S L M D
 
AT5G13910.1     - - - - - P P P A P P - - - - - - - - - - S N D P V D Y M M M F N Q Y S S T D S P M L Q P H C D Q V D S Y M F G G S Q S
Os017112_Os04t0    D I A A M P D D L P P S V T G G G G G F A S S D - - - - - - - - - E Y S S G G G G M V - - - - D D V S M Y C - G G N G G
 
AT5G13910.1     S N S Y C Y S N D - - S S N E L P P L P S D L S N S C Y S Q P Q W T W T G D D Y S S E Y V H S P M F S R M P P V S D S F
Os017112_Os04t0    G S S W C D A S D F A S Y S S S S P A A A A A A G S - - - - - - - - - H G M Y F E E G Y V H S P L F S P M P A V D D A G
 
AT5G13910.1     P Q G F N Y F G S - - - - - -
Os017112_Os04t0    A D G F Q L G G S S S S Y Y Y
 
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