fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G14140.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031712 not found in 257aa AT5G14140.1 1st_1st 0.342465753 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G14140.1     MSFVKKLEFKNIVVLTNEVVVNLSSEDIKEKENGVSYTWAFFGPNKISYSPGRIQLINRS
pt031712_POPTR_ ------------------------------------------------------------
                                                                            

AT5G14140.1     GGNVQLDTCFMFVRPMATGMAVDTVGELGFPYWNPIRRRFPPDSPFFASGNVERELLAKQ
pt031712_POPTR_ ---------------MAMLVDIDTKTELGFPYWKPIRRRFGPESPFFSSGNIERELLAKQ
                               **  : :**  *******:****** *:****:***:********

AT5G14140.1     VTLDFTEDEINHLHKFV-EIETRRISCPIVGCPERLKSLDHFEDHYNARHTASCSVCSRV
pt031712_POPTR_ VALDLSEDEKHRLQDLINEDGSREVVCPIVGCGAHLISLEHFEDHYNGRHTASCSVCSRV
                *:**::*** ::*:.:: *  :*.: ******  :* **:*******.************

AT5G14140.1     YPTSRLLSIHISEAHDSFFQAKVSRGYDMYECLVEGCGLKFKTYKARHRHLIDKHKFPTT
pt031712_POPTR_ YPTSLLLSIHVSEAHDSFFQAKVARGYAMYECLVEGCGLKFKNYKGRQQHLVDKHKFPSS
                **** *****:************:*** **************.**.*::**:******::

AT5G14140.1     FEFFKKTQLSKKRREKLQRQHVSKLKHEEDKEAASSDAMEVEDKGSLDGLVSALSSLTTS
pt031712_POPTR_ FEFFKKAHLSKKAR---QKQHRKQAIHRSEE---TSSKMDIEGE-TIDGLVSAVSKLSTS
                ******::**** *   *:** .:  *..::   :*. *::*.: ::******:*.*:**

AT5G14140.1     DTTPSNVSFGRRHGRGLTFVPRIPINSKVAAAVDGDGWILPSPRSSNALELHVFLTTLHL
pt031712_POPTR_ DSSPSSISFGHRNTRGLTFVPR--------------------------------------
                *::**.:***:*: ********                                      

AT5G14140.1     PLQPLDEDSYVWKLVAQAVIYAIWKQRNNFIHNQQSIPAAWVFKTIDREMRSLT-PSMRG
pt031712_POPTR_ --------------------------------------------AVQREKRADSVPT--G
                                                            :::** *: : *:  *

AT5G14140.1     GTGRSSETL
pt031712_POPTR_ GKQ------
                *.
BoxShade v3.31 C (beta, 970507) Output
AT5G14140.1     M S F V K K L E F K N I V V L T N E V V V N L S S E D I K E K E N G V S Y T W A F F G P N K I S Y S P G R I Q L I N R S
pt031712_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G14140.1     G G N V Q L D T C F M F V R P M A T G M A V D T V G E L G F P Y W N P I R R R F P P D S P F F A S G N V E R E L L A K Q
pt031712_POPTR_    - - - - - - - - - - - - - - - M A M L V D I D T K T E L G F P Y W K P I R R R F G P E S P F F S S G N I E R E L L A K Q
 
AT5G14140.1     V T L D F T E D E I N H L H K F V - E I E T R R I S C P I V G C P E R L K S L D H F E D H Y N A R H T A S C S V C S R V
pt031712_POPTR_    V A L D L S E D E K H R L Q D L I N E D G S R E V V C P I V G C G A H L I S L E H F E D H Y N G R H T A S C S V C S R V
 
AT5G14140.1     Y P T S R L L S I H I S E A H D S F F Q A K V S R G Y D M Y E C L V E G C G L K F K T Y K A R H R H L I D K H K F P T T
pt031712_POPTR_    Y P T S L L L S I H V S E A H D S F F Q A K V A R G Y A M Y E C L V E G C G L K F K N Y K G R Q Q H L V D K H K F P S S
 
AT5G14140.1     F E F F K K T Q L S K K R R E K L Q R Q H V S K L K H E E D K E A A S S D A M E V E D K G S L D G L V S A L S S L T T S
pt031712_POPTR_    F E F F K K A H L S K K A R - - - Q K Q H R K Q A I H R S E E - - - T S S K M D I E G E - T I D G L V S A V S K L S T S
 
AT5G14140.1     D T T P S N V S F G R R H G R G L T F V P R I P I N S K V A A A V D G D G W I L P S P R S S N A L E L H V F L T T L H L
pt031712_POPTR_    D S S P S S I S F G H R N T R G L T F V P R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G14140.1     P L Q P L D E D S Y V W K L V A Q A V I Y A I W K Q R N N F I H N Q Q S I P A A W V F K T I D R E M R S L T - P S M R G
pt031712_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A V Q R E K R A D S V P T - - G
 
AT5G14140.1     G T G R S S E T L
pt031712_POPTR_    G K Q - - - - - -
 
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