fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G14340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp003312 not found in 354aa AT5G14340.1 1st_1st 0.448897795 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G14340.1     MGRKPCCDKIGLKRGPWTIEEDHRLMNFILNNGIHCWRIVPKLAGLLRCGKSCRLRWINY
pp003312_Pp1s43 MGRKPCCEKVGLKRGPWAADEDKKLVSYINAHGVSCWRAIPKLAGLLRCGKSCRLRWTNY
                *******:*:*******: :**::*:.:*  :*: *** :***************** **

AT5G14340.1     LRPDLKRGGFTDAEEDRIMELHSQLGNRWSKIASHFSGRTDNEIKNHWNTKIKKKMKHLG
pp003312_Pp1s43 LRPDLKRGGFTDAEENLILDLHATLGNRWSKIAMQLPGRTDNEIKNYWNTHLKKKLCSMG
                ***************: *::**: ********* ::.*********:***::***:  :*

AT5G14340.1     LDPATHKPMNDITHQTDPNQDKKPNMCSTINEGEEIKDQTPKDDVITETTKTLMLSDNDE
pp003312_Pp1s43 LDPVTHKPVDSACTDGDTETADEGNLDSS--EGHSGHSKVMENSLASKVS--------DE
                ***.****::.   : *.:  .: *: *:  **.. :.:. ::.: ::.:        **

AT5G14340.1     ELVAKNCKILCAEEVDLESLFETQCNEI--------------SSSSF-------------
pp003312_Pp1s43 LAQLKTIDYL-GERMDTQKPFPTTCNEIPEQGAISGKSCSLDTTNSFKEHKPDVFVKLEE
                    *. . * .*.:* :. * * ****              ::.**             

AT5G14340.1     ----------------------------SSLC----------------------------
pp003312_Pp1s43 GTYTTGPDHMNAIALENHTPLGPNSEGAADSCWLPQEQSLDTAVGGSSFYQEVAVMNGGG
                                            :. *                            

AT5G14340.1     ----------SNISRSESSSYLAE-------DSISLEQWDLDMTD-PFVP-----WDLFA
pp003312_Pp1s43 LFRQLSGFTQSNMATAGWSTYFGETPGQPSSTGCSISSWNQSFVQPPGVPPSKEIQKLAA
                          **:: :  *:*:.*        . *:..*: .:.: * **      .* *

AT5G14340.1     NLDDNLFLL
pp003312_Pp1s43 ILDQI----
                 **:
BoxShade v3.31 C (beta, 970507) Output
AT5G14340.1     M G R K P C C D K I G L K R G P W T I E E D H R L M N F I L N N G I H C W R I V P K L A G L L R C G K S C R L R W I N Y
pp003312_Pp1s43    M G R K P C C E K V G L K R G P W A A D E D K K L V S Y I N A H G V S C W R A I P K L A G L L R C G K S C R L R W T N Y
 
AT5G14340.1     L R P D L K R G G F T D A E E D R I M E L H S Q L G N R W S K I A S H F S G R T D N E I K N H W N T K I K K K M K H L G
pp003312_Pp1s43    L R P D L K R G G F T D A E E N L I L D L H A T L G N R W S K I A M Q L P G R T D N E I K N Y W N T H L K K K L C S M G
 
AT5G14340.1     L D P A T H K P M N D I T H Q T D P N Q D K K P N M C S T I N E G E E I K D Q T P K D D V I T E T T K T L M L S D N D E
pp003312_Pp1s43    L D P V T H K P V D S A C T D G D T E T A D E G N L D S S - - E G H S G H S K V M E N S L A S K V S - - - - - - - - D E
 
AT5G14340.1     E L V A K N C K I L C A E E V D L E S L F E T Q C N E I - - - - - - - - - - - - - - S S S S F - - - - - - - - - - - - -
pp003312_Pp1s43    L A Q L K T I D Y L - G E R M D T Q K P F P T T C N E I P E Q G A I S G K S C S L D T T N S F K E H K P D V F V K L E E
 
AT5G14340.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S L C - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp003312_Pp1s43    G T Y T T G P D H M N A I A L E N H T P L G P N S E G A A D S C W L P Q E Q S L D T A V G G S S F Y Q E V A V M N G G G
 
AT5G14340.1     - - - - - - - - - - S N I S R S E S S S Y L A E - - - - - - - D S I S L E Q W D L D M T D - P F V P - - - - - W D L F A
pp003312_Pp1s43    L F R Q L S G F T Q S N M A T A G W S T Y F G E T P G Q P S S T G C S I S S W N Q S F V Q P P G V P P S K E I Q K L A A
 
AT5G14340.1     N L D D N L F L L
pp003312_Pp1s43    I L D Q I - - - -
 
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