fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G14340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041395 not found in 149aa AT5G14340.1 not_1st 0.462925851 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G14340.1     MGRKPCCDKIGLKRGPWTIEEDHRLMNFILNNGIHCWRIVPKLAGLLRCGKSCRLRWINY
pt041395_POPTR_ MGRRPCCDKVGLKRGTWSVEEDQKLMNFILSNGIKCWRHVPKLAGLLRCGKSCRLRWMNY
                ***:*****:*****.*::***::******.***:*** ******************:**

AT5G14340.1     LRPDLKRGGFTDAEEDRIMELHSQLGNRWSKIASHFSGRTDNEIKNHWNTKIKKKMKHLG
pt041395_POPTR_ LRPDLKRGAFSEAEEDHLVELHSRLGNRWSKIAAFFPGRTDNEIKNHWNTRIKKRLKLLG
                ********.*::****:::****:*********:.*.*************:***::* **

AT5G14340.1     LDPATHKPMNDITHQTDPNQDKKPNMCSTINEGEEIKDQTPKDDVITETTKTLMLSDNDE
pt041395_POPTR_ VDPQGHEP--------------------------------PIEQA---------------
                :**  *:*                                * ::.               

AT5G14340.1     ELVAKNCKILCAEEVDLESLFETQCNEISSSSFSSLCSNISRSESSSYLAEDSISLEQWD
pt041395_POPTR_ ---------------------ETNCDAKEST-----------------------------
                                     **:*:  .*:                             

AT5G14340.1     LDMTDPFVPWDLFANLDDNLFLL
pt041395_POPTR_ ------------FAAMKE-----
                            ** :.:
BoxShade v3.31 C (beta, 970507) Output
AT5G14340.1     M G R K P C C D K I G L K R G P W T I E E D H R L M N F I L N N G I H C W R I V P K L A G L L R C G K S C R L R W I N Y
pt041395_POPTR_    M G R R P C C D K V G L K R G T W S V E E D Q K L M N F I L S N G I K C W R H V P K L A G L L R C G K S C R L R W M N Y
 
AT5G14340.1     L R P D L K R G G F T D A E E D R I M E L H S Q L G N R W S K I A S H F S G R T D N E I K N H W N T K I K K K M K H L G
pt041395_POPTR_    L R P D L K R G A F S E A E E D H L V E L H S R L G N R W S K I A A F F P G R T D N E I K N H W N T R I K K R L K L L G
 
AT5G14340.1     L D P A T H K P M N D I T H Q T D P N Q D K K P N M C S T I N E G E E I K D Q T P K D D V I T E T T K T L M L S D N D E
pt041395_POPTR_    V D P Q G H E P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P I E Q A - - - - - - - - - - - - - - -
 
AT5G14340.1     E L V A K N C K I L C A E E V D L E S L F E T Q C N E I S S S S F S S L C S N I S R S E S S S Y L A E D S I S L E Q W D
pt041395_POPTR_    - - - - - - - - - - - - - - - - - - - - - E T N C D A K E S T - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G14340.1     L D M T D P F V P W D L F A N L D D N L F L L
pt041395_POPTR_    - - - - - - - - - - - - F A A M K E - - - - -
 
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