fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G14340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023618 not found in 488aa AT4G22680.1 1st_not 0.442885771 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G14340.1     --MGRKPCCDKIGLKRGPWTIEEDHRLMNFILNNGIHCWRIVPKLAGLLRCGKSCRLRWI
Sb023618_Sorbi1 FGMGRQPCCDKLGVKRGPWTAEEDRKLINFILTNGHCCWRAVPKLAGLLRCGKSCRLRWT
                  ***:*****:*:****** ***::*:****.**  *** ****************** 

AT5G14340.1     NYLRPDLKRGGFTDAEEDRIMELHSQLGNRWSKIASHFSGRTDNEIKNHWNTKIKKKMKH
Sb023618_Sorbi1 NYLRPDLKRGLLTDAEEQVVIDLHGKLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLIK
                ********** :*****: :::**.:*********:::.*************:****: :

AT5G14340.1     LGLDPATHKPMNDITHQTDPNQDKKPNMCS-TINEGEEIKDQTPK-DDVITETTKTLMLS
Sb023618_Sorbi1 MGIDPVTHEPL-------DRKTSSSPATTSQSAKSDEATKQQSPENDDVVVM--------
                :*:**.**:*:       * : ...*   * : :..*  *:*:*: ***:.         

AT5G14340.1     DNDEELVAKNCKILCAEEVDLESLFETQCNEISSSSFSSLCSNISRSESSSYLAEDSISL
Sb023618_Sorbi1 ---RDVPADGC-----------SPTESSTNTVSTGG----------SSSSSSGGHDQDPL
                   .:: *..*           *  *:. * :*:..          *.***  ..*. .*

AT5G14340.1     EQWDLDMTDP--------------------------FVPWDLFAN---------LDDNLF
Sb023618_Sorbi1 VKWLLEEEPPTGDEPWLNFSGSVDVDEFSSIAAGPELLPWDGATDWLLDYQDFGLGDSAT
                 :* *:   *                          ::***  ::         *.*.  

AT5G14340.1     LL--------------
Sb023618_Sorbi1 LVDGYMVNNSSNGAKL
                *:
BoxShade v3.31 C (beta, 970507) Output
AT5G14340.1     - - M G R K P C C D K I G L K R G P W T I E E D H R L M N F I L N N G I H C W R I V P K L A G L L R C G K S C R L R W I
Sb023618_Sorbi1    F G M G R Q P C C D K L G V K R G P W T A E E D R K L I N F I L T N G H C C W R A V P K L A G L L R C G K S C R L R W T
 
AT5G14340.1     N Y L R P D L K R G G F T D A E E D R I M E L H S Q L G N R W S K I A S H F S G R T D N E I K N H W N T K I K K K M K H
Sb023618_Sorbi1    N Y L R P D L K R G L L T D A E E Q V V I D L H G K L G N R W S K I A A K L P G R T D N E I K N H W N T H I K K K L I K
 
AT5G14340.1     L G L D P A T H K P M N D I T H Q T D P N Q D K K P N M C S - T I N E G E E I K D Q T P K - D D V I T E T T K T L M L S
Sb023618_Sorbi1    M G I D P V T H E P L - - - - - - - D R K T S S S P A T T S Q S A K S D E A T K Q Q S P E N D D V V V M - - - - - - - -
 
AT5G14340.1     D N D E E L V A K N C K I L C A E E V D L E S L F E T Q C N E I S S S S F S S L C S N I S R S E S S S Y L A E D S I S L
Sb023618_Sorbi1    - - - R D V P A D G C - - - - - - - - - - - S P T E S S T N T V S T G G - - - - - - - - - - S S S S S S G G H D Q D P L
 
AT5G14340.1     E Q W D L D M T D P - - - - - - - - - - - - - - - - - - - - - - - - - - F V P W D L F A N - - - - - - - - - L D D N L F
Sb023618_Sorbi1    V K W L L E E E P P T G D E P W L N F S G S V D V D E F S S I A A G P E L L P W D G A T D W L L D Y Q D F G L G D S A T
 
AT5G14340.1     L L - - - - - - - - - - - - - -
Sb023618_Sorbi1    L V D G Y M V N N S S N G A K L
 
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