fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G14340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm044064 not found in 276aa AT5G14340.1 1st_1st 0.553106212 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G14340.1     MGRKPCCDKIGLKRGPWTIEEDHRLMNFILNNGIHCWRIVPKLAGLLRCGKSCRLRWINY
gm044064_Glyma1 MGRQPCCDKVGLKRGPWTIEEDHKLMNFILNNGIHCWRSVPKLAGLLRCGKSCRLRWINY
                ***:*****:*************:************** *********************

AT5G14340.1     LRPDLKRGGFTDAEEDRIMELHSQLGNRWSKIASHFSGRTDNEIKNHWNTKIKKKMKHLG
gm044064_Glyma1 LRPDLKRGGFTEMEEDQIIELHSGLGNRWSKIASHFPGRTDNEIKNHWNTRIKKRLKLLG
                ***********: ***:*:**** ************.*************:***::* **

AT5G14340.1     LDPATHKPMNDITHQTDPNQDKK---PNMCSTINEGEEIKD-------QTPKDDVITETT
gm044064_Glyma1 LDPVTHKPIEQ-KENTDENTNKTNPHPSIFGGSEENVEIKSLENGGTKEMAKTEGKREEN
                ***.****::: ..:** * :*.   *.: .  :*. ***.       : .* :   * .

AT5G14340.1     KTLMLSDNDEELVAKNCKILCAEEVDLESLFETQCNEISSSSFSSLC-SNISRSES----
gm044064_Glyma1 NKVINWDDTSELL-NNFEMLCS-KLDLGSWMMSQ--ETNTST-NSLCSSSVSMDDTSHLS
                :.::  *: .**: :* ::**: ::** * : :*  * .:*: .*** *.:* .::    

AT5G14340.1     ---SSYLAEDSISLEQWDLDMTDPFVPWDLFANLDDNLFLL----
gm044064_Glyma1 MDESSYLQEN--SLQQW-VDSMDSILSWDGFNPLDQDILFLENRE
                   **** *:  **:** :*  *.::.** *  **:::::*
BoxShade v3.31 C (beta, 970507) Output
AT5G14340.1     M G R K P C C D K I G L K R G P W T I E E D H R L M N F I L N N G I H C W R I V P K L A G L L R C G K S C R L R W I N Y
gm044064_Glyma1    M G R Q P C C D K V G L K R G P W T I E E D H K L M N F I L N N G I H C W R S V P K L A G L L R C G K S C R L R W I N Y
 
AT5G14340.1     L R P D L K R G G F T D A E E D R I M E L H S Q L G N R W S K I A S H F S G R T D N E I K N H W N T K I K K K M K H L G
gm044064_Glyma1    L R P D L K R G G F T E M E E D Q I I E L H S G L G N R W S K I A S H F P G R T D N E I K N H W N T R I K K R L K L L G
 
AT5G14340.1     L D P A T H K P M N D I T H Q T D P N Q D K K - - - P N M C S T I N E G E E I K D - - - - - - - Q T P K D D V I T E T T
gm044064_Glyma1    L D P V T H K P I E Q - K E N T D E N T N K T N P H P S I F G G S E E N V E I K S L E N G G T K E M A K T E G K R E E N
 
AT5G14340.1     K T L M L S D N D E E L V A K N C K I L C A E E V D L E S L F E T Q C N E I S S S S F S S L C - S N I S R S E S - - - -
gm044064_Glyma1    N K V I N W D D T S E L L - N N F E M L C S - K L D L G S W M M S Q - - E T N T S T - N S L C S S S V S M D D T S H L S
 
AT5G14340.1     - - - S S Y L A E D S I S L E Q W D L D M T D P F V P W D L F A N L D D N L F L L - - - -
gm044064_Glyma1    M D E S S Y L Q E N - - S L Q Q W - V D S M D S I L S W D G F N P L D Q D I L F L E N R E
 
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