fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G14750.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023029 not found in 216aa AT5G14750.1 1st_1st 0.503512880 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G14750.1     MRKKVSSSGDEGNNEYKKGLWTVEEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCRLR
pt023029_POPTR_ MQ-------GAGNGEYRKGLWTEEEDRILTDHVKVHGKGKWNQIAKVTGLKRCGKSCRLR
                *:       . **.**:***** ***:** *:**.****:**:*** *************

AT5G14750.1     WMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL
pt023029_POPTR_ WMNYLSPSVKRGVFSEEEDDLIIRLHKLLGNRWSLIAGRVPGRTDNQVKNHWNTHLSKRL
                *******.**** *:*:*:****************** ************:*******:*

AT5G14750.1     GIKDQKTKQSNGDIVYQINLPNPTETSEETKISNIVDNNN--ILGDEIQEDHQGSNYLSS
pt023029_POPTR_ GIKQKKCKVSASSSKFSEKLGANSRTKLSSNDEPILSHNGEAEIHTEIQDNSEKVKEMTS
                ***::* * * ..  :. :*   :.*. .:: . *:.:*.   :  ***:: :  : ::*

AT5G14750.1     -------------LWV-HEDEFELSTLTNMMDFIDGH----CF--
pt023029_POPTR_ SQDPVLFGDCYDNFWLSNSDPFSCS--PNLMEFLDQSLDLFCYNL
                             :*: :.* *. *  .*:*:*:*      *:
BoxShade v3.31 C (beta, 970507) Output
AT5G14750.1     M R K K V S S S G D E G N N E Y K K G L W T V E E D K I L M D Y V K A H G K G H W N R I A K K T G L K R C G K S C R L R
pt023029_POPTR_    M Q - - - - - - - G A G N G E Y R K G L W T E E E D R I L T D H V K V H G K G K W N Q I A K V T G L K R C G K S C R L R
 
AT5G14750.1     W M N Y L S P N V K R G N F T E Q E E D L I I R L H K L L G N R W S L I A K R V P G R T D N Q V K N Y W N T H L S K K L
pt023029_POPTR_    W M N Y L S P S V K R G V F S E E E D D L I I R L H K L L G N R W S L I A G R V P G R T D N Q V K N H W N T H L S K R L
 
AT5G14750.1     G I K D Q K T K Q S N G D I V Y Q I N L P N P T E T S E E T K I S N I V D N N N - - I L G D E I Q E D H Q G S N Y L S S
pt023029_POPTR_    G I K Q K K C K V S A S S S K F S E K L G A N S R T K L S S N D E P I L S H N G E A E I H T E I Q D N S E K V K E M T S
 
AT5G14750.1     - - - - - - - - - - - - - L W V - H E D E F E L S T L T N M M D F I D G H - - - - C F - -
pt023029_POPTR_    S Q D P V L F G D C Y D N F W L S N S D P F S C S - - P N L M E F L D Q S L D L F C Y N L
 
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