fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G14750.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm055101 not found in 274aa AT3G13540.1 1st_not 0.423887587 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G14750.1     MRKKVSSSGDEGNNEY--KKGLWTVEEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCR
gm055101_Glyma2 MGRKANC-----DNQYAMNRGPWSAEEDKILMNYVQVHGEGKWRELSKRAGLKRCGKSCR
                * :*...     :*:*  ::* *:.*******:**:.**:*:*..::*::**********

AT5G14750.1     LRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSK
gm055101_Glyma2 LRWLNYLKPDIKRGNISSDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRK
                ***:***.*::****::.:******************** *:******::******:* *

AT5G14750.1     KLGIKDQKTKQSNGDIVYQI-------------NLPNPTET-------------SEETKI
gm055101_Glyma2 KAEHKHDKIPSHNDNIPIKLRIESPGCSKNSFGNVLDPTKSPHPMRCTKVMMPVNDSVNT
                *   *.:*  . *.:*  ::             *: :**::             .:..: 

AT5G14750.1     SNIV----DNNNILGDEIQEDHQGSNYLSSLWVHEDEFELSTLTNMMDFIDG--------
gm055101_Glyma2 TNLITTSWDNHNPSSASMQLD----DYNHCLTGVLQEFDISDL--LMSYEDDFRFNGYAC
                :*::    **:*  . .:* *    :*  .*    :**::* *  :*.: *.        

AT5G14750.1     -----HCF-------------------------------------
gm055101_Glyma2 VEIPQHIFEDETCRLDDSLGEEAWYENWKNDPYFPQDQDMGFSSF
                     * *
BoxShade v3.31 C (beta, 970507) Output
AT5G14750.1     M R K K V S S S G D E G N N E Y - - K K G L W T V E E D K I L M D Y V K A H G K G H W N R I A K K T G L K R C G K S C R
gm055101_Glyma2    M G R K A N C - - - - - D N Q Y A M N R G P W S A E E D K I L M N Y V Q V H G E G K W R E L S K R A G L K R C G K S C R
 
AT5G14750.1     L R W M N Y L S P N V K R G N F T E Q E E D L I I R L H K L L G N R W S L I A K R V P G R T D N Q V K N Y W N T H L S K
gm055101_Glyma2    L R W L N Y L K P D I K R G N I S S D E E D L I I R L H K L L G N R W S L I A G R L P G R T D N E I K N Y W N T Y L R K
 
AT5G14750.1     K L G I K D Q K T K Q S N G D I V Y Q I - - - - - - - - - - - - - N L P N P T E T - - - - - - - - - - - - - S E E T K I
gm055101_Glyma2    K A E H K H D K I P S H N D N I P I K L R I E S P G C S K N S F G N V L D P T K S P H P M R C T K V M M P V N D S V N T
 
AT5G14750.1     S N I V - - - - D N N N I L G D E I Q E D H Q G S N Y L S S L W V H E D E F E L S T L T N M M D F I D G - - - - - - - -
gm055101_Glyma2    T N L I T T S W D N H N P S S A S M Q L D - - - - D Y N H C L T G V L Q E F D I S D L - - L M S Y E D D F R F N G Y A C
 
AT5G14750.1     - - - - - H C F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm055101_Glyma2    V E I P Q H I F E D E T C R L D D S L G E E A W Y E N W K N D P Y F P Q D Q D M G F S S F
 
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