fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb002496 not found in 86aa AT3G28857.1 1st_not 0.56 II

Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G15160.1     MSSSRRSRQASSSSRISDDQITDLISKLRQSIPEIRQNRRSNTVSASKVLQETCNYIRNL
Sb002496_Sorbi1 MSSGRR-------GRISDDEINELISKLQALLPESSRRRNASRSSASKLLKETCAYIKSL
                ***.**       .*****:*.:*****:  :**  :.*.:.  ****:*:*** **:.*

AT5G15160.1     NKEADDLSDRLTQLLESIDPNSPQAAVIRSLING
Sb002496_Sorbi1 HREVDDLSERLSGLMSTMDNDSPQAEIIRSLLR-
                ::*.****:**: *:.::* :**** :****:. 


BoxShade v3.31 C (beta, 970507) Output
AT5G15160.1     M S S S R R S R Q A S S S S R I S D D Q I T D L I S K L R Q S I P E I R Q N R R S N T V S A S K V L Q E T C N Y I R N L
Sb002496_Sorbi1    M S S G R R - - - - - - - G R I S D D E I N E L I S K L Q A L L P E S S R R R N A S R S S A S K L L K E T C A Y I K S L
 
AT5G15160.1     N K E A D D L S D R L T Q L L E S I D P N S P Q A A V I R S L I N G
Sb002496_Sorbi1    H R E V D D L S E R L S G L M S T M D N D S P Q A E I I R S L L R -
 
0