fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb022206 not found in 213aa AT1G26945.1 not_not 0.546666666 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G15160.1     ----------------------------------------MSSSR-RSRQASSSSRISDD
Sb022206_Sorbi1 LPFHHLCISNLLASLLTSQFVSRSLAKLLSPISQTTTSTKMSSRRSRSRQ-SGSSRITEE
                                                        *** * **** *.****:::

AT5G15160.1     QITDLISKLRQSIPEIR--QNRRSNTVSASKVLQETCNYIRNLNKEADDLSDRLTQLLES
Sb022206_Sorbi1 QISDLVSKLQDLLPEARLQSNAR---VPSARVLQETCNYIRSLHQEVDDLSERLSELLAT
                **:**:***:: :** *  .* *   *.:::**********.*::*.****:**::** :

AT5G15160.1     IDPNSPQAAVIRSLING
Sb022206_Sorbi1 SDMSSAQAAVIRSLLM-
                 * .*.********:
BoxShade v3.31 C (beta, 970507) Output
AT5G15160.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S S R - R S R Q A S S S S R I S D D
Sb022206_Sorbi1    L P F H H L C I S N L L A S L L T S Q F V S R S L A K L L S P I S Q T T T S T K M S S R R S R S R Q - S G S S R I T E E
 
AT5G15160.1     Q I T D L I S K L R Q S I P E I R - - Q N R R S N T V S A S K V L Q E T C N Y I R N L N K E A D D L S D R L T Q L L E S
Sb022206_Sorbi1    Q I S D L V S K L Q D L L P E A R L Q S N A R - - - V P S A R V L Q E T C N Y I R S L H Q E V D D L S E R L S E L L A T
 
AT5G15160.1     I D P N S P Q A A V I R S L I N G
Sb022206_Sorbi1    S D M S S A Q A A V I R S L L M -
 
0