fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051002 not found in 91aa AT1G26945.1 1st_not 0.733333333 II
Gm035037 not found in 91aa AT1G26945.1 not_not 0.733333333 III
Gm025833 not found in 91aa AT1G26945.1 not_not 0.686666666 III
Gm050375 not found in 92aa AT1G26945.1 not_not 0.68 III
Gm022905 not found in 93aa AT1G26945.1 not_not 0.68 III
Gm002763 not found in 93aa AT1G26945.1 not_not 0.68 III
Gm000625 not found in 93aa AT1G26945.1 not_not 0.666666666 III
Gm049258 not found in 93aa AT1G26945.1 not_not 0.666666666 III
Gm010049 not found in 92aa AT1G74500.1 not_not 0.626666666 III
Gm015729 not found in 92aa AT1G74500.1 not_not 0.613333333 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G15160.1     MSSSRRSR--QASSSSRISDDQITDLISKLRQSIPEIRQNRRSNTVSASKVLQETCNYIR
gm010049_Glyma0 -MSSRRSRSRQTSSSRNITDDQINDLVSKLQQLLPEIR-DRRSDKVSASKVLQETCNYIR
gm025833_Glyma0 -MSSRRSR--QHSGSTRISDDQIIELVSKLRQLVPEIR-NRRSDKVSASKVLQETCNYIR
gm035037_Glyma1 -MSSRRSR--QQSASTRISDDQIIDLVSKLRQLVPEIR-DRRSDKVSASKVLQETCNYIR
gm002763_Glyma0 -MSSRRSRSRQSGASAEITDAQITDLVSKLQQLIPELR-ARRSDKVSAAKVLQETCNYIK
gm000625_Glyma0 -MSSRRSRSRQSGASAEITDAQITDLVSKLQQLIPELR-ARRSDKVSSAKVLQETCNYIK
gm049258_Glyma1 -MSSRRSRSSQSDVSTEITDAQITDIISKLQQLIPELD-ARRSDKVSASKVLQETCNYIK
gm015729_Glyma0 -MSSRRSRSRQTSSSRNITDDQINDLVSKLQQLLPEIR-DRRSDKVSASKVLQETCNYIR
gm051002_Glyma1 -MSSRRSR--QQSASTRISDDQIIDLVSKLRQLVPEIR-DRRSDKVSASKVLQETCNYIR
gm050375_Glyma1 -MSSRRSR--QHSGSTRISDDQIIELVSKLRQLVPEIR-NRRSDKVSASKVLQETCNYIR
gm022905_Glyma0 -MSSRRSRSRQSGVSTEITDAQITDLISKLQQLIPELR-ARRSDKVSASKVLQETCNYIK
                  ******  * . * .*:* ** :::***:* :**:   ***:.**::**********:

AT5G15160.1     NLNKEADDLSDRLTQLLESIDPNSPQAAVIRSLING
gm010049_Glyma0 SLHREVDDLSERLSELLATTD--TAQAAIIRNLLMQ
gm025833_Glyma0 SLHREVSDLSERLSQLLTTIDADSAEAGIIRSLLN-
gm035037_Glyma1 SLHREVDDLSERLSQLLATIDADSPEAAIIRSLIN-
gm002763_Glyma0 NLHREVDDLSDRLSELLANTDSNSAQAAIIRSLLM-
gm000625_Glyma0 NLHREVDDLSDRLSELLANTDSNSAQAAIIRSLLM-
gm049258_Glyma1 SLHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLL-
gm015729_Glyma0 SLHREVGDLSERLSELLDTTD--TAQAAIIRNLLMQ
gm051002_Glyma1 SLHREVDDLSERLSQLLATIDADSPEAAIIRSLIN-
gm050375_Glyma1 GLHREVSDLSERLSQLLTTIDADSAEAGIIRSLLNQ
gm022905_Glyma0 SLHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLM-
                .*::*..***:**::** . *  :.:*.:**.*:
BoxShade v3.31 C (beta, 970507) Output
AT5G15160.1     M S S S R R S R - - Q A S S S S R I S D D Q I T D L I S K L R Q S I P E I R Q N R R S N T V S A S K V L Q E T C N Y I R
gm010049_Glyma0    - M S S R R S R S R Q T S S S R N I T D D Q I N D L V S K L Q Q L L P E I R - D R R S D K V S A S K V L Q E T C N Y I R
gm025833_Glyma0    - M S S R R S R - - Q H S G S T R I S D D Q I I E L V S K L R Q L V P E I R - N R R S D K V S A S K V L Q E T C N Y I R
gm035037_Glyma1    - M S S R R S R - - Q Q S A S T R I S D D Q I I D L V S K L R Q L V P E I R - D R R S D K V S A S K V L Q E T C N Y I R
gm002763_Glyma0    - M S S R R S R S R Q S G A S A E I T D A Q I T D L V S K L Q Q L I P E L R - A R R S D K V S A A K V L Q E T C N Y I K
gm000625_Glyma0    - M S S R R S R S R Q S G A S A E I T D A Q I T D L V S K L Q Q L I P E L R - A R R S D K V S S A K V L Q E T C N Y I K
gm049258_Glyma1    - M S S R R S R S S Q S D V S T E I T D A Q I T D I I S K L Q Q L I P E L D - A R R S D K V S A S K V L Q E T C N Y I K
gm015729_Glyma0    - M S S R R S R S R Q T S S S R N I T D D Q I N D L V S K L Q Q L L P E I R - D R R S D K V S A S K V L Q E T C N Y I R
gm051002_Glyma1    - M S S R R S R - - Q Q S A S T R I S D D Q I I D L V S K L R Q L V P E I R - D R R S D K V S A S K V L Q E T C N Y I R
gm050375_Glyma1    - M S S R R S R - - Q H S G S T R I S D D Q I I E L V S K L R Q L V P E I R - N R R S D K V S A S K V L Q E T C N Y I R
gm022905_Glyma0    - M S S R R S R S R Q S G V S T E I T D A Q I T D L I S K L Q Q L I P E L R - A R R S D K V S A S K V L Q E T C N Y I K
 
AT5G15160.1     N L N K E A D D L S D R L T Q L L E S I D P N S P Q A A V I R S L I N G
gm010049_Glyma0    S L H R E V D D L S E R L S E L L A T T D - - T A Q A A I I R N L L M Q
gm025833_Glyma0    S L H R E V S D L S E R L S Q L L T T I D A D S A E A G I I R S L L N -
gm035037_Glyma1    S L H R E V D D L S E R L S Q L L A T I D A D S P E A A I I R S L I N -
gm002763_Glyma0    N L H R E V D D L S D R L S E L L A N T D S N S A Q A A I I R S L L M -
gm000625_Glyma0    N L H R E V D D L S D R L S E L L A N T D S N S A Q A A I I R S L L M -
gm049258_Glyma1    S L H R E V D D L S D R L S Q L L A T T D S N S A Q A A I I R S L L L -
gm015729_Glyma0    S L H R E V G D L S E R L S E L L D T T D - - T A Q A A I I R N L L M Q
gm051002_Glyma1    S L H R E V D D L S E R L S Q L L A T I D A D S P E A A I I R S L I N -
gm050375_Glyma1    G L H R E V S D L S E R L S Q L L T T I D A D S A E A G I I R S L L N Q
gm022905_Glyma0    S L H R E V D D L S D R L S Q L L A T T D S N S A Q A A I I R S L L M -
 
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