fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G15210.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050382 not found in 308aa AT3G28920.1 1st_not 0.520179372 II
Pt020175 not found in 334aa AT3G28920.1 1st_not 0.506726457 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G15210.1     MDVIA--TTTTIV-------------SDLDSRQPEIEAPIRI------QPAKPISFSNG-
gm050382_Glyma1 MDITP---TTTIINTTTTP-------SAAKSPEHETETPTRITTPITPTTTKTLSFSNGV
pt020175_POPTR_ MDITPATATATATGTATTPTNNNTNTTIPKSPEADTGTPTRI------PQTKPLSFTNGV
                **: .   *:*               :  .* : :  :* **        :*.:**:** 

AT5G15210.1     -KRC--HHHHLAS---EAVAVATYKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASL
gm050382_Glyma1 LKRH--HHHHLHH---PMPAVVTYKECLKNHAANLGGLALDGCGEFMPSPTATAADPSSI
pt020175_POPTR_ LKRHHPHHHHLHNHFAPPPVVITYKECLKNHAATIGGHALDGCGEFMPSPTATHTDPTSL
                 **   *****        .* *********** :** ************: .  **:*:

AT5G15210.1     TCAACGCHRNFHRRE-EDPSSLSAIVPAIEFRPHNRHQLPPPPPPHLAGIRSPDDDDSAS
gm050382_Glyma1 KCAACGCHRNFHRREPEDPPITSNTTHVIEYQPHHRHH-PPPPLHAAAAARSP---NSAS
pt020175_POPTR_ KCAACGCHRNFHRREPEDSPPHTTAITTIEYQPHHRHH-PPPPQAHPQHNRSP---NSAS
                .************** **..  :    .**::**:**: ****       ***   :***

AT5G15210.1     PPPISSSY------MLLALSGGRGGAN-----------TAVP---MSRKRFRTKFSQYQK
gm050382_Glyma1 PPPISSSYYPSAPHMLLALSAGLA---------APPESTAAPSAALSRKRFRTKFSQEQK
pt020175_POPTR_ PPPISSSYYPSAPHMLLALSGGVSGLNENVNINAPPRAGSSP-----RKRFRTKFSQSQK
                ********      ******.* .               : *     ********** **

AT5G15210.1     EKMFEFSERVGWRMPKADDVVVKEFCREIGVDKSVFKVWMHNNKIS--------------
gm050382_Glyma1 EKMHKFAEKVGWKIQKRDEDLIHEFCNEVGVDRSVLKVWMHNNKNTFAKK-------DNN
pt020175_POPTR_ ERMHQFAEKVGWKMQKRDEDLVQEFCNEVGVDRSALKVWMHNNKNSFGKKEHLNGNNDDN
                *:*.:*:*:***:: * *: :::***.*:***:*.:******** :              

AT5G15210.1     ------------GRSGARRAN--------------GGVVVGGVGDSRQSVVPTNGSFSST
gm050382_Glyma1 IVFENPNNNHGSGSGGGEDPAEDPSRNHY------GGVNVG-----------ANGSSSSS
pt020175_POPTR_ IRSSNLENSYSNNESNKDITNNNNNNNHHHFENDSHAAHVG-----------TNGSSSSS
                            . ..   .                .. **           :*** **:
BoxShade v3.31 C (beta, 970507) Output
AT5G15210.1     M D V I A - - T T T T I V - - - - - - - - - - - - - S D L D S R Q P E I E A P I R I - - - - - - Q P A K P I S F S N G -
gm050382_Glyma1    M D I T P - - - T T T I I N T T T T P - - - - - - - S A A K S P E H E T E T P T R I T T P I T P T T T K T L S F S N G V
pt020175_POPTR_    M D I T P A T A T A T A T G T A T T P T N N N T N T T I P K S P E A D T G T P T R I - - - - - - P Q T K P L S F T N G V
 
AT5G15210.1     - K R C - - H H H H L A S - - - E A V A V A T Y K E C L K N H A A G I G G H A L D G C G E F M P S P S F N S N D P A S L
gm050382_Glyma1    L K R H - - H H H H L H H - - - P M P A V V T Y K E C L K N H A A N L G G L A L D G C G E F M P S P T A T A A D P S S I
pt020175_POPTR_    L K R H H P H H H H L H N H F A P P P V V I T Y K E C L K N H A A T I G G H A L D G C G E F M P S P T A T H T D P T S L
 
AT5G15210.1     T C A A C G C H R N F H R R E - E D P S S L S A I V P A I E F R P H N R H Q L P P P P P P H L A G I R S P D D D D S A S
gm050382_Glyma1    K C A A C G C H R N F H R R E P E D P P I T S N T T H V I E Y Q P H H R H H - P P P P L H A A A A A R S P - - - N S A S
pt020175_POPTR_    K C A A C G C H R N F H R R E P E D S P P H T T A I T T I E Y Q P H H R H H - P P P P Q A H P Q H N R S P - - - N S A S
 
AT5G15210.1     P P P I S S S Y - - - - - - M L L A L S G G R G G A N - - - - - - - - - - - T A V P - - - M S R K R F R T K F S Q Y Q K
gm050382_Glyma1    P P P I S S S Y Y P S A P H M L L A L S A G L A - - - - - - - - - A P P E S T A A P S A A L S R K R F R T K F S Q E Q K
pt020175_POPTR_    P P P I S S S Y Y P S A P H M L L A L S G G V S G L N E N V N I N A P P R A G S S P - - - - - R K R F R T K F S Q S Q K
 
AT5G15210.1     E K M F E F S E R V G W R M P K A D D V V V K E F C R E I G V D K S V F K V W M H N N K I S - - - - - - - - - - - - - -
gm050382_Glyma1    E K M H K F A E K V G W K I Q K R D E D L I H E F C N E V G V D R S V L K V W M H N N K N T F A K K - - - - - - - D N N
pt020175_POPTR_    E R M H Q F A E K V G W K M Q K R D E D L V Q E F C N E V G V D R S A L K V W M H N N K N S F G K K E H L N G N N D D N
 
AT5G15210.1     - - - - - - - - - - - - G R S G A R R A N - - - - - - - - - - - - - - G G V V V G G V G D S R Q S V V P T N G S F S S T
gm050382_Glyma1    I V F E N P N N N H G S G S G G G E D P A E D P S R N H Y - - - - - - G G V N V G - - - - - - - - - - - A N G S S S S S
pt020175_POPTR_    I R S S N L E N S Y S N N E S N K D I T N N N N N N N H H H F E N D S H A A H V G - - - - - - - - - - - T N G S S S S S
 
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